DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and Galnt18

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_776100.2 Gene:Galnt18 / 233733 MGIID:2446239 Length:622 Species:Mus musculus


Alignment Length:581 Identity:184/581 - (31%)
Similarity:274/581 - (47%) Gaps:84/581 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 EAYSDSENEIARPATQSP----YEQIIQLDLQKQKVGLGEQGVAVHLSGAAKERGDEIYKKIALN 117
            ||.:..|...|.|.|.|.    :.|  :|..:.::|.|.:                  ::....|
Mouse    79 EAPAKPEEAEAEPFTDSSLFAHWGQ--ELSPEGRRVALKQ------------------FQYYGYN 123

  Fly   118 EELSEQLTYNRSVGDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALK 182
            ..||::|..:|.:.|.|...|....| .||||..|:|.||.||..|||||::||.:.......||
Mouse   124 AYLSDRLPLDRPLPDLRPSGCRNLSF-PDSLPEVSIVFIFVNEALSVLLRSIHSAMERTPSHLLK 187

  Fly   183 EIILVDDGSDNVELGAKLDYY---VRTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLD 244
            |||||||.|.|.||..||..|   |..:.| |.:.::|...:.||||:|::|.|.||..|:...|
Mouse   188 EIILVDDNSSNEELKEKLTEYVDKVNGQKP-GFIKVVRHSKQEGLIRSRVSGWRAATAPVVALFD 251

  Fly   245 AHCEGNIGWCEPLLQRIKESRTSVLVPIIDVIDANDFQYSTNGYKSFQVGGFQWNGHFDWINLPE 309
            ||.|.|:||.||:|.||||:|..::.|..|.|..::|:...   ......||.|.....::|.| 
Mouse   252 AHVEFNVGWAEPVLTRIKENRKRIISPSFDNIKYDNFEIEE---YPLAAQGFDWELWCRYLNPP- 312

  Fly   310 REKQRQRRECKQEREICPAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFR------ 368
                  :...|.|....|..||.:. |.|.:||:||.|:|..||.|:.:||||:|:..|      
Mouse   313 ------KAWWKLENSTAPIRSPALI-GCFIVDRQYFEEIGLLDEGMEVYGGENVELGIRVSEISH 370

  Fly   369 ---------IWQCGGTIETIPCSRVGHIFRDFHPYKFPNDRDTH-GINTARMALVWMDEYINIFF 423
                     :|||||::|.:||||:.||.|...||  ..|...| ..|..|:|.|||||:.:..:
Mouse   371 TGLSSAPMMVWQCGGSVEVLPCSRIAHIERAHKPY--TEDLTAHVRRNALRVAEVWMDEFKSHVY 433

  Fly   424 L--NRPDLKFHADIGDVTHRVMLRKKLRCKSFEWYLKNIYPEKFVPTKDVQGWGKV-HAVNSNIC 485
            :  |.|......||||:|.|..|||:|:||:|.|||.::|||..: ..|:..:|.: :::.:::|
Mouse   434 MAWNIPQEDSGIDIGDITARKALRKQLQCKTFRWYLVSVYPEMRM-YSDIIAYGVLQNSLKTDLC 497

  Fly   486 LDDLLQNNEKPYNAGLYPCGKVLQKSQLFSFTNTNVLRNELSCATVQHSE--------SPPYRVV 542
            ||........|.   :|.|..:  ..|...:|::..:...:...||...:        |.| |::
Mouse   498 LDQGPDTENVPI---VYICHGM--TPQNVYYTSSQQIHVGILSPTVDDDDNRCLVDVNSRP-RLI 556

  Fly   543 MVPCMENDEFNEQWRYEHQHIIHS-NTGMCLDHQGLKSLD---DAQVAPCDPHSESQRWTI 599
            .....:.......|::.....|.: .:..||:.|....::   ...:..|    ..|.|||
Mouse   557 ECSYAKAKRMKLHWQFSQGGSIQNRKSKRCLELQENSDMEFGFQLVLQKC----SGQHWTI 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 117/299 (39%)
pp-GalNAc-T 152..461 CDD:133004 132/329 (40%)
Ricin_B_lectin 474..597 CDD:279046 21/135 (16%)
RICIN 481..599 CDD:238092 21/129 (16%)
Galnt18NP_776100.2 Catalytic subdomain A 153..267 55/114 (48%)
pp-GalNAc-T 157..473 CDD:133004 132/329 (40%)
Catalytic subdomain B 324..400 32/76 (42%)
Ricin_B_lectin 484..611 CDD:279046 21/136 (15%)
RICIN 486..613 CDD:238092 22/136 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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