DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and gly-5

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001379253.1 Gene:gly-5 / 176736 WormBaseID:WBGene00001630 Length:626 Species:Caenorhabditis elegans


Alignment Length:597 Identity:226/597 - (37%)
Similarity:323/597 - (54%) Gaps:61/597 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VQQNGSPEEPPVAPLVRAAALRGHGRERFEAYSDSENEIARPATQ-SPYEQIIQLDLQKQKVGLG 91
            :|..|.|.||  .|:|.        ..:.|........:|:|... .|.:.|.:   :......|
 Worm    62 IQGFGPPIEP--EPVVE--------NNKVEEEEQPGGNLAKPKFMVDPNDPIYK---KGDAAQAG 113

  Fly    92 EQGVAV-----HLSGAAKERGDEIYKKIALNEELSEQLTYNRSVGDHRNPLCAKQRFDSDSLPTA 151
            |.|.||     .||...|.:.|:.....|.|:..|:.::.:|::..:.:..|..::: :::||..
 Worm   114 ELGKAVVVDKTKLSTEEKAKYDKGMLNNAFNQYASDMISVHRTLPTNIDAECKTEKY-NENLPRT 177

  Fly   152 SVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDDGSDNVELGAKLDYYVRTRIPSGKVTIL 216
            ||:|.|.||.:|||||||||.|....:..|:|::||||.||.......|:.|:...  .|||.||
 Worm   178 SVIICFHNEAWSVLLRTVHSVLERTPDHLLEEVVLVDDFSDMDHTKRPLEEYMSQF--GGKVKIL 240

  Fly   217 RLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGWCEPLLQRIKESRTSVLVPIIDVIDANDF 281
            |::.|.|||||||.||.:|||:||.:||:|||...||.||||.|||...|:|:.|:|||||.|.|
 Worm   241 RMEKREGLIRARLRGAAVATGEVLTYLDSHCECMEGWMEPLLDRIKRDPTTVVCPVIDVIDDNTF 305

  Fly   282 QYSTNGYKSFQVGGFQWNGHFDWINLPEREKQRQRRECKQEREICPAYSPTMAGGLFAIDRRYFW 346
            :|..:......||||.|...|:|.::|||:::      .:.|.|.|..|||||||||:||::||.
 Worm   306 EYHHSKAYFTSVGGFDWGLQFNWHSIPERDRK------NRTRPIDPVRSPTMAGGLFSIDKKYFE 364

  Fly   347 EVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIPCSRVGHIFRDFHPYKFPNDRDTHGINTARMA 411
            ::|:||...|.|||||||:||:||.||||:|.:|||.|||:||...|||:....:....|:.|:|
 Worm   365 KLGTYDPGFDIWGGENLELSFKIWMCGGTLEIVPCSHVGHVFRKRSPYKWRTGVNVLKRNSIRLA 429

  Fly   412 LVWMDEYINIFFLNRPDLKFHADIGDVTHRVMLRKKLRCKSFEWYLKNIYPEKFVPTKDV-QGWG 475
            .||:|:| ..::..|.:.:. .|.||::.|..||:.|.||||:|||.|||||.|||.:.| :|..
 Worm   430 EVWLDDY-KTYYYERINNQL-GDFGDISSRKKLREDLGCKSFKWYLDNIYPELFVPGESVAKGEV 492

  Fly   476 KVHAVNSNICLDDLLQNNEKPYNAGLYPC-GKVLQKSQLFSFTNTNVLRNELSCATVQHSESPPY 539
            :..||....|||.::..:||....|.|.| |:  ..:|.:..:....:|.:.||.....|:    
 Worm   493 RNSAVQPARCLDCMVGRHEKNRPVGTYQCHGQ--GGNQYWMLSKDGEIRRDESCVDYAGSD---- 551

  Fly   540 RVVMVPCMENDEFNEQWRYEH-----QHIIHSN-TGMCLDHQGLKSLDDAQVAPCDPHSESQRW- 597
             |::.|| ...:.|::|||.|     ||.:... .||..|  |.|    .::..|......|.| 
 Worm   552 -VMVFPC-HGMKGNQEWRYNHDTGRLQHAVSQKCLGMTKD--GAK----LEMVACQYDDPYQHWK 608

  Fly   598 --------TIEH 601
                    .|||
 Worm   609 FKEYNEAKAIEH 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 138/278 (50%)
pp-GalNAc-T 152..461 CDD:133004 152/308 (49%)
Ricin_B_lectin 474..597 CDD:279046 33/129 (26%)
RICIN 481..599 CDD:238092 32/133 (24%)
gly-5NP_001379253.1 pp-GalNAc-T 178..477 CDD:133004 152/308 (49%)
Ricin_B_lectin 488..607 CDD:395527 34/132 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.721928 Normalized mean entropy S3838
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.870

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