DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and gly-9

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001022876.1 Gene:gly-9 / 176557 WormBaseID:WBGene00012934 Length:579 Species:Caenorhabditis elegans


Alignment Length:610 Identity:239/610 - (39%)
Similarity:344/610 - (56%) Gaps:56/610 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLPRFRSFYGKLII--FILVA-LCFILYSKVQQNGSPEEPPVAPLVRAAALRGHGRERFEAYSDS 62
            ::||.:   |..:|  |:.|| .|.:.|.:..:.                     |.:|: :.|.
 Worm     5 IIPRKK---GTFVIAAFLTVAFFCIVAYHRNDRR---------------------RTKFQ-FPDI 44

  Fly    63 E---NEIAR-PAT-QSPYEQIIQLDLQKQKVGLGEQGVAVHLSGAAKERGDEIYKKIALNEELSE 122
            |   .|:.| |.| .....||......::  |.||:|..|.|:|...|.|....||..:|...|:
 Worm    45 EKYAEELVRLPETWNGELHQIPNYTAPRE--GPGEKGKPVVLTGKDAELGQADMKKWFMNVHASD 107

  Fly   123 QLTYNRSVGDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILV 187
            :::.:|.|.|.|...|...::|..:||..||:|||.:|.::.|||||||.::....:.|:|:||:
 Worm   108 KISLDRDVPDPRIQACKDIKYDYAALPKTSVIIIFTDEAWTPLLRTVHSVINRSPPELLQEVILL 172

  Fly   188 DDGSDNVELGAKLDYYVRTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIG 252
            ||.|...||...||.:::..  .|||.::|...|.|||||:|||||.|.||:::|||:|||.|.|
 Worm   173 DDNSKRQELQEPLDEHIKRF--GGKVRLIRKHVRHGLIRAKLAGAREAVGDIIVFLDSHCEANHG 235

  Fly   253 WCEPLLQRIKESRTSVLVPIIDVIDANDFQYSTNGYKSFQVGGFQWNGHFDWINLPEREKQRQRR 317
            |.||::|||.:.||:::.|:||.|..|...|  :|..|...|||.|..||.|..|.|.|::|:.:
 Worm   236 WLEPIVQRISDERTAIVCPMIDSISDNTLAY--HGDWSLSTGGFSWALHFTWEGLSEEEQKRRTK 298

  Fly   318 ECKQEREICPAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIPCS 382
            .....|      ||||||||.|.:|.||:|||.|||:||.|||||||:|||.|.|||:||.||||
 Worm   299 PTDYIR------SPTMAGGLLAANREYFFEVGGYDEEMDIWGGENLEISFRAWMCGGSIEFIPCS 357

  Fly   383 RVGHIFRDFHPYKFP---NDRDTHGINTARMALVWMDEYINIFFLNRPDLKFHADIGDVTHRVML 444
            .||||||..|||...   |::|.||.|:.|:|.||||:|..:::::|.||: ..|:||:|.|..|
 Worm   358 HVGHIFRAGHPYNMTGRNNNKDVHGTNSKRLAEVWMDDYKRLYYMHREDLR-TKDVGDLTARHEL 421

  Fly   445 RKKLRCKSFEWYLKNIYPEKFVPTKDVQGWGKVHAV--NSNICLDDLLQNNEKPYNAGLYPCGKV 507
            ||:|.||.|:|:|.||...||:..:||..:|.:|.|  .:.:|.|.|.::.:.....|::.|...
 Worm   422 RKRLNCKPFKWFLDNIAKGKFIMDEDVVAYGALHTVVSGTRMCTDTLQRDEKMSQLLGVFHCQGK 486

  Fly   508 LQKSQLFSFTNTNVLRNELSCATVQHSESPPYRVVMVPCMENDEFNEQWRYEHQHIIHSNTGMCL 572
            ....||.|.:....||.|.:||:.::.     .:.|..|.:..:|||:|.||::.|.:..:|.|:
 Worm   487 GSSPQLMSLSKEGNLRRENTCASEENG-----NIRMKTCSKKAQFNERWAYENKMIRNLKSGKCM 546

  Fly   573 DHQGLKSLDDAQVAPCDPHSESQRW 597
            ....||..|:|.|..||...|.|:|
 Worm   547 STANLKPGDNAIVVECDEKDEHQKW 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 141/281 (50%)
pp-GalNAc-T 152..461 CDD:133004 157/311 (50%)
Ricin_B_lectin 474..597 CDD:279046 36/124 (29%)
RICIN 481..599 CDD:238092 34/117 (29%)
gly-9NP_001022876.1 pp-GalNAc-T 137..438 CDD:133004 157/311 (50%)
Ricin_B_lectin 450..571 CDD:279046 36/125 (29%)
RICIN 458..573 CDD:238092 34/119 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 155 1.000 Domainoid score I2596
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H76582
Inparanoid 1 1.050 413 1.000 Inparanoid score I1036
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52585
OrthoDB 1 1.010 - - D261568at33208
OrthoFinder 1 1.000 - - FOG0016573
OrthoInspector 1 1.000 - - oto20135
orthoMCL 1 0.900 - - OOG6_112333
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X13469
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.880

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