DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and Galnt10

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_038941033.1 Gene:Galnt10 / 170501 RGDID:69409 Length:752 Species:Rattus norvegicus


Alignment Length:542 Identity:206/542 - (38%)
Similarity:300/542 - (55%) Gaps:61/542 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 QKVGLGEQGVAVHLSGAAKERGDEIYKKIALNEELSEQLTYNRSVGDHRNPLCAKQRFDSDSLPT 150
            |:||.||||....::.|  ||.|:.|::...|..:|::::.|||:.|.|:|.|..:.: .::||.
  Rat   234 QRVGNGEQGKPYPMTDA--ERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKLY-LETLPN 295

  Fly   151 ASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDDGSDNVELGAKLDYYVRTRIPSGKVTI 215
            .|::|.|.||.:|.|||||||.|:....:.:.||:||||.||...|...|:.|: ...||  |.|
  Rat   296 TSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYM-ALFPS--VRI 357

  Fly   216 LRLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGWCEPLLQRIKESRTSVLVPIIDVIDAND 280
            ||.|.|.||||.|:.||..|||||:.|||:|||.|:.|..|||.||..:|.:::.|:|||||.:|
  Rat   358 LRTKKREGLIRTRMLGASAATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDD 422

  Fly   281 FQYSTNGYKSFQVGGFQWNGHFDWINLPEREKQRQRRECKQEREICPAYSPTMAGGLFAIDRRYF 345
            |:|.|....:.: |.|.|..::..|.:|.        |.::.....|..||.|||||||:||::|
  Rat   423 FRYETQAGDAMR-GAFDWEMYYKRIPIPP--------ELQKADPSDPFESPVMAGGLFAVDRKWF 478

  Fly   346 WEVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIPCSRVGHIFRDFHPYKFPNDRDTHGI----N 406
            ||:|.||..::.||||..|:||::|.|||.:|.|||||||||:|.:.|||.|     .|:    |
  Rat   479 WELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKYVPYKVP-----AGVSLARN 538

  Fly   407 TARMALVWMDEYINIFFLNRPDLKFHADIGDVTHRVMLRKKLRCKSFEWYLKNI---YPEKFVPT 468
            ..|:|.||||||....:..||:.: |...|||..:..||..|.||||:|::..|   .|:.:.|.
  Rat   539 LKRVAEVWMDEYAEYIYQRRPEYR-HLSAGDVVAQKKLRGSLNCKSFKWFMTKIAWDLPKFYPPV 602

  Fly   469 K-DVQGWGKVHAVNSNICLDDLLQNNEKPYNAGLYPC----GKVLQKS-QLFSFTNTNVLRNELS 527
            : ....||::..|.:.:|.|........|..  |..|    |:....| |:|:||    .|.::.
  Rat   603 EPPAAAWGEIRNVGTGLCTDTKHGTLGSPLR--LETCIRGRGEAAWNSMQVFTFT----WREDIR 661

  Fly   528 CATVQHSE----------SPPYRVVMVPCMENDEFNEQWRY-EHQHIIHSNTGMCLDHQGLKSLD 581
            ....||::          ||   |.:..| .:.:.|:.|:| :.:.:.|..:|.|:|    .|..
  Rat   662 PGDPQHTKKFCFDAVSHTSP---VTLYDC-HSMKGNQLWKYRKDKTLYHPVSGSCMD----CSES 718

  Fly   582 DAQV--APCDPHSESQRWTIEH 601
            |.::  ..|:|.|.:|:|..||
  Rat   719 DHRIFMNTCNPSSLTQQWLFEH 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 131/282 (46%)
pp-GalNAc-T 152..461 CDD:133004 144/315 (46%)
Ricin_B_lectin 474..597 CDD:279046 34/140 (24%)
RICIN 481..599 CDD:238092 32/135 (24%)
Galnt10XP_038941033.1 pp-GalNAc-T 297..592 CDD:133004 143/312 (46%)
Ricin_B_lectin 608..736 CDD:395527 34/141 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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