DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and Galnt4

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_056552.1 Gene:Galnt4 / 14426 MGIID:894692 Length:578 Species:Mus musculus


Alignment Length:607 Identity:232/607 - (38%)
Similarity:325/607 - (53%) Gaps:61/607 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IIFILVALCFIL--YSKVQQNGSPEEPPVAPLVRAAALRGHGRERFEAYSDSENEIARPATQSPY 75
            ::..|:.|.:||  :|......||         .|...|..|..|.......|.::::|....| 
Mouse    13 LLLALLTLAYILVEFSVSTLYASP---------GAGGARELGPRRLPDLDTREEDLSQPLYIKP- 67

  Fly    76 EQIIQLDLQKQKVGLGEQGVAVHL---SGAAKERGDEIYKKIALNEELSEQLTYNRSVGDHRNPL 137
                    ......|||.|.|..|   .|..|:: :|:.::.|:|..||::::.:|.:.|.|...
Mouse    68 --------PADSHALGEWGRASKLQLNEGELKQQ-EELIERYAINIYLSDRISLHRHIEDKRMYE 123

  Fly   138 CAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDDGSDNVELGAKLDY 202
            |..::|...||||.||:|.|:||.:|.||||:||.|.|.....|||||||||.||.:.|.|:|:.
Mouse   124 CKAKKFHYRSLPTTSVIIAFYNEAWSTLLRTIHSVLETSPAVLLKEIILVDDLSDRIYLKAQLET 188

  Fly   203 YVRTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGWCEPLLQRIKESRTS 267
            |:..   ..:|.::|...|.||:||||.||..||||||.|||.|||.|.||.||||:||....|:
Mouse   189 YISN---LERVRLIRTNKREGLVRARLIGATFATGDVLTFLDCHCECNTGWLEPLLERISRDETA 250

  Fly   268 VLVPIIDVIDANDFQ-YSTNGYKSFQVGGFQWNGHFDWINLPEREKQRQRRECKQEREICPAYSP 331
            ::.|:||.||.|.|: |...|..  .:|||.|...|.|.::|:.|:.|      :...|.|..||
Mouse   251 IVCPVIDTIDWNTFEFYMQTGEP--MIGGFDWRLTFQWHSVPKHERDR------RTSRIDPIRSP 307

  Fly   332 TMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIPCSRVGHIFRDFHPYKF 396
            ||||||||:.::||..:|:||..|:.|||||||:|||:|||||.:|..|||.|||:|....||..
Mouse   308 TMAGGLFAVSKKYFQYLGTYDTGMEVWGGENLELSFRVWQCGGKLEIHPCSHVGHVFPKRAPYAR 372

  Fly   397 PNDRDTHGINTARMALVWMDEYINIFFLNRPDLKFHADIGDVTHRVMLRKKLRCKSFEWYLKNIY 461
            ||...    ||||.|.||||||...|:...|..:..| .||::.|.:||::|:||||:|||||::
Mouse   373 PNFLQ----NTARAAEVWMDEYKEHFYNRNPPARKEA-YGDLSERKLLRERLKCKSFDWYLKNVF 432

  Fly   462 PEKFVPTKDVQGW-GKVHAVN-SNICLD-DLLQNNEKPYNAGLYPC-GKVLQKSQLFSFTNTNVL 522
            ....|| :|..|| |.:.::. |:.||| :...||....|..|:.| |:  ..:|.|.:|:...:
Mouse   433 SNLHVP-EDRPGWHGAIRSMGISSECLDYNAPDNNPTGANLSLFGCHGQ--GGNQFFEYTSNKEI 494

  Fly   523 R----NELSCATVQHSESPPYRVVMVPCMEND---EFNEQWRY-EHQHIIHSNTGMCLD-HQGLK 578
            |    .|| ||.|...:.   .|.|..|.::.   ..|..|.: |...|.|.:|.:||. ::..:
Mouse   495 RFNSVTEL-CAEVPQQKD---YVGMQNCPKDGLPVPVNIIWHFKEDGTIFHPHTRLCLSAYRTAE 555

  Fly   579 SLDDAQVAPCDPHSESQRWTIE 600
            ......:..||...::|.|..|
Mouse   556 GRPSVHMKTCDALDKNQLWRFE 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 142/279 (51%)
pp-GalNAc-T 152..461 CDD:133004 155/309 (50%)
Ricin_B_lectin 474..597 CDD:279046 35/135 (26%)
RICIN 481..599 CDD:238092 34/129 (26%)
Galnt4NP_056552.1 WcaA 133..430 CDD:223539 157/312 (50%)
Catalytic subdomain A 134..243 63/111 (57%)
pp-GalNAc-T 138..432 CDD:133004 155/309 (50%)
Catalytic subdomain B 303..365 39/61 (64%)
RICIN 446..576 CDD:238092 35/135 (26%)
Ricin_B_lectin 446..574 CDD:279046 34/133 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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