DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant1 and Galnt3

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_056551.2 Gene:Galnt3 / 14425 MGIID:894695 Length:633 Species:Mus musculus


Alignment Length:668 Identity:230/668 - (34%)
Similarity:320/668 - (47%) Gaps:134/668 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RSFY--GKLIIFILVALCF------ILYSKVQ-------------------------------QN 31
            |.|:  |.:|.|.||.|..      :.|||.:                               |.
Mouse    18 RKFWKLGAVIFFFLVVLILMQREVSVQYSKEESKMERNLKNKNKMLDFMLEAVNNIKDAMPKMQI 82

  Fly    32 GSP--------EEPPVAPLVRAAALRGHGRERFEAYSDSENEIARPATQSPYEQIIQLDLQKQKV 88
            |:|        |.|.:.....||.|    :..|:......|  |..|:..|: :|..|..::|| 
Mouse    83 GAPIKENIDVRERPCLQGYYTAAEL----KPVFDRPPQDSN--APGASGKPF-KITHLSPEEQK- 139

  Fly    89 GLGEQGVAVHLSGAAKERGDEIYKKIALNEELSEQLTYNRSVG-DHRNPLCAKQRFD-SDSLPTA 151
                          .||||:   .|...|...|::::.:|.:| |.|.|.|.:|:|. ...|||.
Mouse   140 --------------EKERGE---TKHCFNAFASDRISLHRDLGPDTRPPECIEQKFKRCPPLPTT 187

  Fly   152 SVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDDGSDNVELGAKLDYYVRTRIPSGKVTIL 216
            ||:|:|.||.:|.|||||||.|.:.....|||||||||.|.:..|..||:.|::   ....|.|:
Mouse   188 SVIIVFHNEAWSTLLRTVHSVLYSSPAILLKEIILVDDASVDDYLHEKLEEYIK---QFSIVKIV 249

  Fly   217 RLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGWCEPLLQRIKESRTSVLVPIIDVIDANDF 281
            |.:.|.|||.|||.||.:||.:.|.|||||||...||.||||.||.|:.|:|:.|.|..||.|.|
Mouse   250 RQQERKGLITARLLGAAVATAETLTFLDAHCECFYGWLEPLLARIAENYTAVVSPDIASIDLNTF 314

  Fly   282 Q------YSTNGYKSFQVGGFQWNGHFDWINLPEREKQRQRRECKQEREICPAYSPTMAGGLFAI 340
            :      |.:|..:    |.|.|:..|.|.:||:.||||::      .|..|..:||.|||||:|
Mouse   315 EFNKPSPYGSNHNR----GNFDWSLSFGWESLPDHEKQRRK------DETYPIKTPTFAGGLFSI 369

  Fly   341 DRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIPCSRVGHIFRDFHPYKFPNDRDTHGI 405
            .::||..:|||||:|:.|||||:|||||:|||||.:|.:|||.|||:||...|:.||........
Mouse   370 SKKYFEHIGSYDEEMEIWGGENIEMSFRVWQCGGQLEIMPCSVVGHVFRSKSPHTFPKGTQVIAR 434

  Fly   406 NTARMALVWMDEYINIFFLNRPD---LKFHADIGDVTHRVMLRKKLRCKSFEWYLKNIYPEKFVP 467
            |..|:|.||||||..||:....|   :......||::.|..::|:|:||:|.|||..||||.:||
Mouse   435 NQVRLAEVWMDEYKEIFYRRNTDAAKIVKQKSFGDLSKRFEIKKRLQCKNFTWYLNTIYPEAYVP 499

  Fly   468 TKDVQGWGKVHAVNSNICLDDLLQNNEKPYNAGLYPCGKVLQKSQLFSFTNTNVLRNEL------ 526
            ..:....|.:.:|...:|| |:.:||:......||.| ..|..:|.|.::....:|:.:      
Mouse   500 DLNPVISGYIKSVGQPLCL-DVGENNQGGKPLILYTC-HGLGGNQYFEYSAQREIRHNIQKELCL 562

  Fly   527 ----------SCATVQHSESPPYRVVMVPCMENDEFNEQ-WRYEHQHIIHSNT-GMCLDHQGLKS 579
                      :|....|....|              .|| |......::::.. .|||...|   
Mouse   563 HATQGVVQLKACVYKGHRTIAP--------------GEQIWEIRKDQLLYNPLFKMCLSSNG--- 610

  Fly   580 LDDAQVAPCDPHSESQRW 597
             :...:.|||.....|:|
Mouse   611 -EHPNLVPCDATDLLQKW 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 140/284 (49%)
pp-GalNAc-T 152..461 CDD:133004 149/317 (47%)
Ricin_B_lectin 474..597 CDD:279046 28/140 (20%)
RICIN 481..599 CDD:238092 27/135 (20%)
Galnt3NP_056551.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 112..145 11/50 (22%)
WcaA 184..>302 CDD:223539 64/120 (53%)
Catalytic subdomain A 184..293 60/111 (54%)
pp-GalNAc-T 188..493 CDD:133004 149/317 (47%)
Catalytic subdomain B 356..418 39/61 (64%)
Ricin_B_lectin 506..627 CDD:279046 28/140 (20%)
RICIN 507..629 CDD:238092 29/141 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.