DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and galnt6.3

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_004911960.1 Gene:galnt6.3 / 100498043 XenbaseID:XB-GENE-22063205 Length:622 Species:Xenopus tropicalis


Alignment Length:648 Identity:239/648 - (36%)
Similarity:339/648 - (52%) Gaps:87/648 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FRSFYGKL------IIFILVALCFILYSKVQQNGSPEEPPVAPLV-----RAAALRGHGRERFEA 58
            ||..||.|      |:|::  ..||::..| .||:.::|.:..:|     ....:||       |
 Frog     4 FRRNYGPLKLAMVGIVFVI--FVFIMHKDV-GNGAKDDPWIKNIVVRKDQMLDMMRG-------A 58

  Fly    59 YSDSENEIARPATQSPYEQIIQLDLQKQKVGLGEQGVAVHLS-------------GA-------- 102
            .::.::.|.:....:|.::  :..::::|:.|........|.             ||        
 Frog    59 MNNLKDSIPKLQIMAPVQE--EGPVEEKKLCLPGYYTPAELKPFMERPPQDPNSPGADGKGFKKD 121

  Fly   103 --------AKERGDEIYKKIALNEELSEQLTYNRSVG-DHRNPLCAKQRFD-SDSLPTASVVIIF 157
                    .||:|   :.|...|...|::::.:|::| |.|.|:|.:|:|. ..||||.||:|:|
 Frog   122 TWTEEETKEKEKG---FDKHCFNAFASDRISLHRALGPDTRPPVCIEQKFKRCPSLPTTSVIIVF 183

  Fly   158 FNEPYSVLLRTVHSTLSTCNEKALKEIILVDDGSDNVELGAKLDYYVRT-RIPSGKVTILRLKNR 221
            .||.:|.|||||:|.|.|.....|||||||||.|::..|..|||.||:. :|    |.|.|.|.|
 Frog   184 HNEAWSTLLRTVYSVLYTSPAILLKEIILVDDASEDEYLKEKLDDYVKALQI----VKIARQKER 244

  Fly   222 LGLIRARLAGARIATGDVLIFLDAHCEGNIGWCEPLLQRIKESRTSVLVPIIDVIDANDFQYS-- 284
            .|||.|||.||.||||:||.|||||||...||.||||.||.|..|:|:.|.|..||.|.|:::  
 Frog   245 KGLITARLLGASIATGEVLTFLDAHCECFHGWLEPLLSRIAEDHTAVVSPDITTIDLNSFEFAKP 309

  Fly   285 TNGYKSFQVGGFQWNGHFDWINLPEREKQRQRRECKQEREICPAYSPTMAGGLFAIDRRYFWEVG 349
            ....|:...|.|.|:..|.|..:|..||:|::      .|..|..|||.|||||:|.:.||..:|
 Frog   310 VQYGKTHSRGNFDWSLTFGWEAIPAAEKERRK------DETYPIKSPTFAGGLFSISKAYFEHIG 368

  Fly   350 SYDEQMDGWGGENLEMSFRIWQCGGTIETIPCSRVGHIFRDFHPYKFPNDRDTHGINTARMALVW 414
            ||||:|:.|||||:|||||:|||||.:|.||||.|||:||...|:.||........|..|:|.||
 Frog   369 SYDEEMEIWGGENVEMSFRVWQCGGQLEIIPCSVVGHVFRTKSPHTFPKGTQVISRNQVRLAEVW 433

  Fly   415 MDEYINIFF-LNRPDLKF--HADIGDVTHRVMLRKKLRCKSFEWYLKNIYPEKFVPTKDVQGWGK 476
            ||:|..|:: .|....|.  ....||::.|:.|:..|:||:|.|||:|||||.|||.:|...:|.
 Frog   434 MDDYKLIYYRRNEQAAKMVREKSFGDISKRLKLKADLQCKNFTWYLENIYPEMFVPDRDPTYYGA 498

  Fly   477 VHAVNSNICLDDLLQNNEKPYNAGLYPCGKVLQKSQLFSFTNTNVLRNELSCATVQHSESPPYRV 541
            |....|..|| |:.:||.......:||| ..:..:|.|.::....||:.::......|:..|..|
 Frog   499 VKNEGSQNCL-DVGENNHGGKPLIMYPC-HGMGGNQYFEYSTHKELRHNIAKQLCLRSKYGPGPV 561

  Fly   542 VMVPCMENDE-----FNEQWRYEHQHIIHSNTG--MCLDHQGLKSLDDAQVAPCDPHSESQRW 597
            .:..|....:     .||:|......:: .|.|  |||..:|    ::...|.|:|....|||
 Frog   562 ELGECQYKGKKTTVPGNEEWELTKDRLL-KNVGSNMCLTARG----ENPSTAECNPSDIHQRW 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 145/282 (51%)
pp-GalNAc-T 152..461 CDD:133004 155/314 (49%)
Ricin_B_lectin 474..597 CDD:279046 32/129 (25%)
RICIN 481..599 CDD:238092 32/124 (26%)
galnt6.3XP_004911960.1 pp-GalNAc-T 178..483 CDD:133004 155/314 (49%)
Ricin_B_lectin 496..619 CDD:366226 32/129 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D261568at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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