DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and galnt5

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_002667267.4 Gene:galnt5 / 100334784 -ID:- Length:768 Species:Danio rerio


Alignment Length:589 Identity:203/589 - (34%)
Similarity:295/589 - (50%) Gaps:102/589 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 SDSENEIARPATQSPYEQIIQL---------------------DLQKQKVGLGEQGVAVHLSGAA 103
            ||...:.::|..|.|.|:.:::                     |..:....:|:.|....:....
Zfish   232 SDITRKPSKPTAQDPAEEALRVLPSTSVKRSGGHHKVKALDVTDRPRDPHAVGQFGQPARVPKNE 296

  Fly   104 KERGDEIYKKIALNEELSEQLTYNRSVGDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRT 168
            :......:.:...|..||||:..:|::.|.|...|: :....|.||:.||:..|.:|.:|.|||:
Zfish   297 ELESRRRWSEGFFNVFLSEQIPIDRAIPDTRPQTCS-ESLVHDDLPSTSVIFCFVDEVWSTLLRS 360

  Fly   169 VHSTLSTCNEKALKEIILVDDGSDNVELGAKLDYYVRTRIPSGKVTILRLKNRLGLIRARLAGAR 233
            |||.|:....:.|||||||||.|....|..:||.|: ::.|  ||.|:.||.|.||||||:|||.
Zfish   361 VHSVLNRSPPQLLKEIILVDDCSTKDYLKEQLDVYM-SQFP--KVRIIHLKERQGLIRARMAGAA 422

  Fly   234 IATGDVLIFLDAHCEGNIGWCEPLLQRIKESRTSVLVPIIDVIDANDFQYSTNGYKSFQVGGFQW 298
            .|||:||.|||:|.|.|:||.||||:||...|..|..|:||||:..|..|..  ..:||.|.|:|
Zfish   423 AATGEVLTFLDSHIECNVGWLEPLLERIYLDRRKVPCPVIDVINDKDMSYML--VDNFQRGIFKW 485

  Fly   299 NGHFDWINLPEREKQRQRRECKQEREI----CPAYSPTM------AGGLFAIDRRYFWEVGSYDE 353
            ...|.|..||  |:..|:.:.|....|    |..:|..:      :|.:|.              
Zfish   486 PLVFGWSALP--EEYIQKNQIKDSDPIRIACCFIHSHILHNNRKKSGNVFL-------------- 534

  Fly   354 QMDGWGGENLEMSFRIWQCGGTIETIPCSRVGHIFRDFHPYKFPNDR-DTHGINTARMALVWMDE 417
                       ..|:||.|||.||.|||||||||||..:||||..|| .|...|.||:|.||:||
Zfish   535 -----------FVFQIWMCGGEIEIIPCSRVGHIFRSDNPYKFTKDRVKTVERNLARVAEVWLDE 588

  Fly   418 YINIFF-------LNRPDLKFHADIGDVTHRVMLRKKLRCKSFEWYLKNIYPEKFVPTKDVQGWG 475
            |..:|:       |:    |...|||::|.::.||:||:||||:|||:|:||:...|.  |:..|
Zfish   589 YKEVFYGHGYQHLLD----KNVTDIGNLTEQIQLREKLKCKSFKWYLENVYPDLDTPV--VKAEG 647

  Fly   476 KVHAVNSNICLDDLLQNNEKPYNAGLYPCGKVLQKSQLFSFTNTNVLRNELSCATVQHSESPPYR 540
            .:..|.:..||  :.||.    :..|..| .:..|||.|:||...:||...||...|.::     
Zfish   648 LIFNVGTRKCL--IFQNE----SFSLTKC-DLTNKSQYFTFTWLRLLRQNTSCLAPQETQ----- 700

  Fly   541 VVMVPCMENDEFNEQWRYEH-----QHI---IHSNTGMCLDHQGLKSLDDAQVAPCDPHSESQRW 597
            :.|.|| :|.:.:.:|.::.     :|:   ::|.. :||: .|:|: |...:..||..|..|:|
Zfish   701 LTMEPC-DNTKPHLRWIHKSGKALTEHLMAEVYSQP-ICLE-AGIKA-DGVFLKGCDRFSTFQKW 761

  Fly   598 TIEH 601
            ...|
Zfish   762 QFTH 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 126/296 (43%)
pp-GalNAc-T 152..461 CDD:133004 141/326 (43%)
Ricin_B_lectin 474..597 CDD:279046 35/130 (27%)
RICIN 481..599 CDD:238092 34/125 (27%)
galnt5XP_002667267.4 Glyco_tranf_GTA_type 344..635 CDD:325014 141/326 (43%)
Ricin_B_lectin 647..761 CDD:306998 35/129 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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