DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and galnt13

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_005168002.1 Gene:galnt13 / 100330695 ZFINID:ZDB-GENE-091204-444 Length:581 Species:Danio rerio


Alignment Length:620 Identity:232/620 - (37%)
Similarity:329/620 - (53%) Gaps:84/620 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RSFYGKLI-----IFILVALCFILY-SKVQQNGSPEEPPVAPLVRAAALRGHGRERFEAYSDSEN 64
            |..|.|::     :::||.:..:|| |:..:..:.::..:.|.:||...|.|             
Zfish     3 RFVYCKVVLTTSLVWVLVDVFLLLYFSECNKCDNRKDHSLLPALRAVMSRAH------------- 54

  Fly    65 EIARPATQSPYEQIIQLDLQKQKVGLGEQGVAVHLSGAAKERGDEIYKKIALNEELSEQLTYNRS 129
                   ::|                ||.|.||.:....:::..|::|....|...|:.:..|||
Zfish    55 -------EAP----------------GEMGKAVVIPKEEQDKMKELFKINQFNLMASDMIALNRS 96

  Fly   130 VGDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDDGSDNV 194
            :.|.|...| |.:...|.||..|:||:|.||.:|.|||||||.::....:.|.||:||||.|:..
Zfish    97 LPDVRLDGC-KTKTYPDDLPNTSIVIVFHNEAWSTLLRTVHSAINRSPRQLLYEILLVDDASERD 160

  Fly   195 ELGAKLDYYVRT-RIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGWCEPLL 258
            .|..||:.||.| .:|   |.|||::.|.|||||||.||....|.|:.|||||||...||.|||:
Zfish   161 FLKEKLEDYVATLEVP---VRILRMEQRTGLIRARLRGAAATRGQVITFLDAHCECTTGWLEPLM 222

  Fly   259 QRIKESRTSVLVPIIDVIDANDFQYSTNGYKSFQVGGFQWNGHFDWINLPEREKQRQRRECKQER 323
            .||||.|.:|:.||||||....|:|......::  |||.|..:|.|..:|:||..|:    |.:|
Zfish   223 ARIKEDRRAVVCPIIDVISDETFEYMAGSDMTY--GGFNWKLNFRWYPVPQREMDRR----KGDR 281

  Fly   324 EICPAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIPCSRVGHIF 388
            .: |..:||||||||:|||.||.|:|:||..||.|||||||||||||||||::|.:.||.|||:|
Zfish   282 TL-PVRTPTMAGGLFSIDRTYFEEIGTYDSGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVF 345

  Fly   389 RDFHPYKFPNDR-DTHGINTARMALVWMDEYINIFFLNRPDLKFHADIGDVTHRVMLRKKLRCKS 452
            |...||.||... .....|..|:|.|||||:.:.|::..|.: ...|.|||:.|..||:.|:||.
Zfish   346 RKATPYSFPGGTGQVINKNNRRLAEVWMDEFKDFFYIISPGV-VRVDYGDVSSRKALRESLKCKP 409

  Fly   453 FEWYLKNIYPEKFVPTKDVQGWGKVHAVNSNICLDDL-LQNNEKPYNAGLYPCGKVLQKSQLFSF 516
            |.|||:|:||:..:|.: ....|::..|.:|.|:|:: .:.|||   .|.:.| ..:..:|:||:
Zfish   410 FSWYLENVYPDSQIPRR-YYSLGEIRNVETNQCVDNMGRKENEK---VGFFNC-HGMGGNQVFSY 469

  Fly   517 TNTNVLRNELSCATVQHSESPPYRVVMVPC--------MEND-EFNEQWRYEHQH--IIHSNTGM 570
            |....:|.:..|........|   |||:.|        .|.| |:..:|.|:.:.  .:|..|..
Zfish   470 TADKEIRTDDLCLDASRLNGP---VVMLKCHHMKGNQMFEYDAEYVGKWEYDFKKRTFLHIITQS 531

  Fly   571 CLDHQGLKSLDDAQVAP----CDPHSESQRWTIEH 601
            ||.   :..|:|....|    || .|..|.||:.:
Zfish   532 CLT---ISRLEDGTYGPTVEYCD-DSPLQAWTLRN 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 143/280 (51%)
pp-GalNAc-T 152..461 CDD:133004 157/310 (51%)
Ricin_B_lectin 474..597 CDD:279046 37/138 (27%)
RICIN 481..599 CDD:238092 36/133 (27%)
galnt13XP_005168002.1 Glyco_tranf_2_3 115..359 CDD:290369 133/253 (53%)
pp-GalNAc-T 118..418 CDD:133004 157/310 (51%)
RICIN 431..560 CDD:238092 38/139 (27%)
Ricin_B_lectin 431..558 CDD:279046 37/137 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

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