DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and galnt18b

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_003199061.1 Gene:galnt18b / 100310831 ZFINID:ZDB-GENE-091014-1 Length:609 Species:Danio rerio


Alignment Length:522 Identity:177/522 - (33%)
Similarity:265/522 - (50%) Gaps:69/522 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 EIYKKIALNEELSEQLTYNRSVGDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTL 173
            ::::....|..||::|:.:|::.|:|...|....:.| :||..|:|.||.||..||:||::||.:
Zfish   117 KMFQYYGYNGYLSDRLSMDRAIPDYRPDGCKNMSYPS-NLPQVSIVFIFVNEALSVILRSIHSVM 180

  Fly   174 STCNEKALKEIILVDDGSDNVELGAKLDYYVR---TRIPSGKVTILRLKNRLGLIRARLAGARIA 235
            :......|||||||||.|:|.||..||..:|:   .:.| |.:.::|...:.||||:|::|.|.|
Zfish   181 NRTPSHLLKEIILVDDNSNNDELKEKLQDFVKETNAKQP-GFIKVVRHSRQEGLIRSRVSGWRAA 244

  Fly   236 TGDVLIFLDAHCEGNIGWCEPLLQRIKESRTSVLVPIIDVIDANDFQYSTNGYKSFQVG--GFQW 298
            :..|:...|||.|.||||.||:||||||.||.::.|..|     :.:|.|...:.:.:.  ||.|
Zfish   245 SAPVVALFDAHVEFNIGWAEPILQRIKEDRTRIISPSFD-----NIKYDTFEIEEYPLSAQGFDW 304

  Fly   299 -------NGHFDWINLPEREKQRQRRECKQEREICPAYSPTMAGGLFAIDRRYFWEVGSYDEQMD 356
                   |....|.||              .....|..||.:. |.|.:||.||.|:|..||.|:
Zfish   305 ELWCRYLNPPKSWWNL--------------NNSTAPIRSPALI-GCFVVDRLYFAEIGLLDEGME 354

  Fly   357 GWGGENLEMSFRIWQCGGTIETIPCSRVGHIFRDFHPYKFPNDRDTH-GINTARMALVWMDEYIN 420
            .:||||:|:..|:|||||::|.:||:|:.||.|...||  ..|...| ..|..|:|.|||||:.:
Zfish   355 IYGGENVELGVRVWQCGGSVEVLPCARIAHIERAHKPY--TEDLTAHVRRNALRVAEVWMDEFKS 417

  Fly   421 IFFL--NRPDLKFHADIGDVTHRVMLRKKLRCKSFEWYLKNIYPEKFVPTKDVQGWGKV-HAVNS 482
            ..::  |.|......||||:..|..|||||:||:|.|||.|||||..:.| |...:|.: :::.:
Zfish   418 HVYMAWNIPQEDSGIDIGDIAERKALRKKLQCKTFRWYLVNIYPEMRMYT-DTVAYGVLRNSLKT 481

  Fly   483 NICLDDLLQNNEKPYNAGLYPCGKVLQKSQLFSFTNTNVLRNELSCATVQHSESP--------PY 539
            ::|||.....:..|.   ||.|..:  ..|...:|:|..|...:...||...::.        | 
Zfish   482 DLCLDQGPDTDNIPI---LYLCHGM--TPQNVYYTSTQQLFVGILSPTVDDDDNKCLVDVNGRP- 540

  Fly   540 RVVMVPCMENDEFNEQWRY-EHQHIIHSNTGMCLDHQGLKSLDDAQ------VAPCDPHSESQRW 597
            |::.............||: :...|.::.:..||:   |...:|.:      :..|    ..|.|
Zfish   541 RLIECSYAVAKRMKLHWRFTQGGSIQNTKSKRCLE---LVENNDNEFGFQLTLQKC----TGQNW 598

  Fly   598 TI 599
            ||
Zfish   599 TI 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 115/293 (39%)
pp-GalNAc-T 152..461 CDD:133004 132/323 (41%)
Ricin_B_lectin 474..597 CDD:279046 25/138 (18%)
RICIN 481..599 CDD:238092 25/132 (19%)
galnt18bXP_003199061.1 pp-GalNAc-T 159..460 CDD:133004 132/323 (41%)
Glyco_tranf_2_2 160..421 CDD:287123 112/283 (40%)
Ricin_B_lectin 471..598 CDD:279046 25/139 (18%)
RICIN 473..600 CDD:238092 26/139 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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