DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and galnt18a

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_009296148.3 Gene:galnt18a / 100170813 ZFINID:ZDB-GENE-080723-30 Length:696 Species:Danio rerio


Alignment Length:638 Identity:195/638 - (30%)
Similarity:297/638 - (46%) Gaps:99/638 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LVALCFIL---------------YSKVQQNGSPEEPPVAPLVRAAALRGHGRERFEAYSDSENEI 66
            ||:.|.||               .:.|..||:         |:.|. |.| .::|:  .||:.|.
Zfish    98 LVSTCVILSGMTNILCLLYVGWITNYVSNNGN---------VKVAG-RTH-EKKFD--DDSKGET 149

  Fly    67 ARPATQ-SPYEQIIQLDLQKQKVGLGEQGVAVHLSGA-----AKERGDEIYKKIAL--------N 117
            .|...: ...|.::...:|::.....|....:.||..     ..|.|.| .:|:||        |
Zfish   150 LRIIERLDRLESVVNQHIQEKPQSDIEDSADLSLSETLFAHWGHELGPE-SRKVALRKFQYYGYN 213

  Fly   118 EELSEQLTYNRSVGDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALK 182
            ..||::|:.:|:|.|.|...|....:.: .||..|::.||.||..||:||:|||.:.......||
Zfish   214 AYLSDRLSLDRAVPDLRPDGCRNISYPT-GLPQVSIIFIFVNEALSVILRSVHSVIQRTPAHLLK 277

  Fly   183 EIILVDDGSDNVELGAKLDYYVRTRIPSGK--VTILRLKNRLGLIRARLAGARIATGDVLIFLDA 245
            |||||||.|:| ||...|..:|.......:  :.::..:.:.||||:|::|.|.|:..::...||
Zfish   278 EIILVDDHSNN-ELLENLQRFVDETNQQQRDFIKVVHHEKQEGLIRSRVSGWRAASAPIVALFDA 341

  Fly   246 HCEGNIGWCEPLLQRIKESRTSVLVPIIDVIDANDFQYSTNGYKSFQVG--GFQWNGHFDWINLP 308
            |.|.:|||.||:|.||:|.||.|:.|..|     :.:|.|...:.:.:.  ||.|.....::|.|
Zfish   342 HVEFSIGWAEPILHRIQEDRTRVISPSFD-----NIKYDTFEIEEYPLSAQGFDWELWCRYLNPP 401

  Fly   309 EREKQRQRRECKQEREICPAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCG 373
                   :....|:.:..|..||.:. |.|.:||.||.|:|..||.|:.:||||:|:..|:|.||
Zfish   402 -------KSWWMQKNQTAPIRSPALI-GCFVVDREYFEEIGLLDEGMEVYGGENVELGIRVWLCG 458

  Fly   374 GTIETIPCSRVGHIFRDFHPYKFPNDRDTH-GINTARMALVWMDEYINIFFL--NRPDLKFHADI 435
            |::|.|||||:.||.|...||  ..|..|| ..|..|:|.|||||:.:..::  |.|......||
Zfish   459 GSVEVIPCSRIAHIERAHKPY--TEDLATHVRRNALRVAEVWMDEFKSHVYMAWNIPQQDSGIDI 521

  Fly   436 GDVTHRVMLRKKLRCKSFEWYLKNIYPEKFVPTKDVQGWGKV-HAVNSNICLDDLLQNNEKPYNA 499
            ||:..|..||::||||.|.|:|.|||.| .....|...:|.: :::..::|:|....::..|.  
Zfish   522 GDIRDRKALRERLRCKPFSWFLNNIYSE-MRTYMDTIAYGVLRNSLRPDLCVDQGPDSDNIPI-- 583

  Fly   500 GLYPCGKVLQKSQLFSFTNTNVLRNELSCATVQHSE--------SPPYRVVMVPCMENDEFNEQW 556
             ||.|..:  ..|...||::..|.......|:...:        |.| |::......|......|
Zfish   584 -LYICHGL--TPQNVYFTSSQQLHVGGLSPTIDDDDNKCLVDVNSRP-RLLECSYASNKHMKLSW 644

  Fly   557 RYEHQHIIHSNTGMCLDHQGLKSLDDAQVAPCDPHS--------ESQRWTIEH 601
                   :.:..|...:.:..:.|:..:.|..| |.        .||:|||.|
Zfish   645 -------LFTQGGSIQNKKSKRCLELVESADVD-HGYQLVLQKCSSQKWTITH 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 109/285 (38%)
pp-GalNAc-T 152..461 CDD:133004 124/315 (39%)
Ricin_B_lectin 474..597 CDD:279046 24/139 (17%)
RICIN 481..599 CDD:238092 24/133 (18%)
galnt18aXP_009296148.3 pp-GalNAc-T 247..547 CDD:133004 124/315 (39%)
RICIN 560..687 CDD:238092 25/140 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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