DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir52d and Ir87a

DIOPT Version :9

Sequence 1:NP_611042.2 Gene:Ir52d / 36716 FlyBaseID:FBgn0050464 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_650290.2 Gene:Ir87a / 41654 FlyBaseID:FBgn0038153 Length:796 Species:Drosophila melanogaster


Alignment Length:500 Identity:96/500 - (19%)
Similarity:180/500 - (36%) Gaps:129/500 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 NIKPDSVCDFY----SKKDQYNIAMVNNNFHQVGIIYACRLFQERNYEKVYLSEGNPIYVDQFRN 180
            |.:...|.|:|    ..:|.||....|                       |....:..|.|...:
  Fly   350 NSEEQPVDDYYYGLQGDEDDYNDTSPN-----------------------YGESDDESYADPGED 391

  Fly   181 MQGALLKSITFNLIPGSMAYRDPKT---GQEKHIGYVANLLNNFVEKVNATLDMQVKLHKAGKKT 242
            ..||         ||      |.:|   |:.|..|....::....|:::.:::||      |:.:
  Fly   392 GDGA---------IP------DTETQSGGKLKLSGIEYEMVQTIAERLHVSIEMQ------GENS 435

  Fly   243 SFYNITKWASEDLVD--IGMSYAAYFE---MTNFDTISYPYLMTSTCFMVPLPDMMPNSEIYMGI 302
            :.|::    .:.|:|  |.|......|   ::.|.:.|.||......:.|...........::..
  Fly   436 NLYHL----FQQLIDGEIEMIVGGIDEDPSISQFVSSSIPYHQDELTWCVARAKRRHGFFNFVAT 496

  Fly   303 VDPPVLVVLIAIFCIFSVMLNYIKQR----SWRSLS--------LVNVLLNDICLRGFLAQPFPF 355
            .:... ..||.||.:...::.::.||    ..|:|:        ::.:|||    :...||.||.
  Fly   497 FNADA-GFLIGIFVVTCSLVVWLAQRVSGFQLRNLNGYFPTCLRVLGILLN----QAIPAQDFPI 556

  Fly   356 PRQSNRKLKLISMLVCFFSVITTTMYTSYLQSFMWGPPIDPKMCSFADLENSRYKLAIRRYDIEM 420
               :.|:|..:|.|:.||   .:..|.|:|.|.:..|....::.:..::.::  |:.:..     
  Fly   557 ---TLRQLFALSFLMGFF---FSNTYQSFLISTLTTPRSSYQIHTLQEIYSN--KMTVMG----- 608

  Fly   421 LRPFNVSMDHVVVFDESSQL-EYLRDSFDDNYMYPMSALSWSAFKE-------QQKLFAFPLFYY 477
                  :.:||...::..:: :|:|:.|...|.. :..|:.:|..|       :|..|..|....
  Fly   609 ------TSEHVRHLNKDGEIFKYIREKFQMCYNL-VDCLNDAAQNEHIAVAVSRQHSFYNPRIQR 666

  Fly   478 SEKLCL-KPISFFSFPIRRHLPYRDLFEEHMLQQ--------NEFGLSTYWI-DRSFSDMVRLKL 532
            ....|. :..|.:.:.:...||.:    .|:|.|        .|.|....|. |.....|:..::
  Fly   667 DRLYCFDRRESLYVYLVTMLLPKK----YHLLHQINPVIQHIIESGHMQKWARDLDMRRMIHEEI 727

  Fly   533 ATMNDFSPPRLEDYIEVSDLSWVFG-MYFTG--LGISCCCFGLEL 574
            ..:.       ||..:........| :.|:|  |.::.|.|..||
  Fly   728 TRVR-------EDPFKALTFDQFRGAIAFSGGLLLVASCVFAFEL 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir52dNP_611042.2 None
Ir87aNP_650290.2 Periplasmic_Binding_Protein_Type_2 408..>475 CDD:304360 16/76 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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