DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir52d and Ir52c

DIOPT Version :9

Sequence 1:NP_611042.2 Gene:Ir52d / 36716 FlyBaseID:FBgn0050464 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster


Alignment Length:575 Identity:327/575 - (56%)
Similarity:436/575 - (75%) Gaps:1/575 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVRIIIILLCLGYTKARILDATNTNHTDLEERLLSLLLRLQQEQFFNTLLIYGEDCAFSSLSRRL 65
            ||.:||||.|||.:.::|||.||.:|.|.:.||..||.|||.|:.::|||:||||||..||..||
  Fly     1 MVWLIIILFCLGNSSSQILDVTNNSHLDFDYRLFGLLQRLQVEKSYDTLLVYGEDCAIPSLFERL 65

  Fly    66 QVPTILVSSGSTSFEWNYSSLALILTCEFKAEREENYQTLKKLQMNRRLILLNGNIKPDSVCDFY 130
            |||.:|||||||:|:||:|||.|||:|.|:.||||||:||.|||.:||||||.|:|||:||||||
  Fly    66 QVPAVLVSSGSTNFDWNFSSLTLILSCNFQDEREENYRTLMKLQTSRRLILLKGHIKPESVCDFY 130

  Fly   131 SKKDQYNIAMVNNNFHQVGIIYACRLFQERNYEKVYLSEGNPIYVDQFRNMQGALLKSITFNLIP 195
            |||:|:|:|||..||:|:.::|:|||||::||||:.|.:|..||.||||||.||.:::::....|
  Fly   131 SKKEQHNVAMVKENFYQLEVVYSCRLFQDQNYEKLNLFDGKSIYKDQFRNMHGAPIRTLSDKEPP 195

  Fly   196 GSMAYRDPKTGQEKHIGYVANLLNNFVEKVNATLDMQVKLHKAGKKTSFYNITKWASEDLVDIGM 260
            .::.|.|.|||:||..|||..|::.||:|||||:.::..|.|..::.||.:||.:.|.|::|||:
  Fly   196 RTIPYIDSKTGEEKFKGYVGMLISQFVKKVNATMQIREDLIKDDEEVSFVDITNFTSNDILDIGI 260

  Fly   261 SYAAYFEMTNFDTISYPYLMTSTCFMVPLPDMMPNSEIYMGIVDPPVLVVLIAIFCIFSVMLNYI 325
            ..|...||:|:|.|||||||:|.|||.||||.:|.|::||.||.|.:|::.:.||||.||::.||
  Fly   261 CEARTLEMSNYDAISYPYLMSSYCFMAPLPDSLPFSDVYMAIVAPSILIMFLIIFCICSVLIIYI 325

  Fly   326 KQRSWRSLSLVNVLLNDICLRGFLAQPFPFPRQSNRKLKLISMLVCFFSVITTTMYTSYLQSFMW 390
            ::||:|||::.:||:||||||||||||||||||.|||||||.|||||.|:|:|||||:|||:|:|
  Fly   326 QERSYRSLTIRSVLMNDICLRGFLAQPFPFPRQYNRKLKLIFMLVCFSSLISTTMYTAYLQAFLW 390

  Fly   391 GPPIDPKMCSFADLENSRYKLAIRRYDIEMLRPFNVSMDHVVVFDESSQLEYLRDSFDDNYMYPM 455
            ||||:|::.||.|::.|||.:||..|:.|.|...|||::.|.::| ..:...||.:|:.||::|:
  Fly   391 GPPIEPRLTSFDDVKKSRYTMAINIYEREFLEALNVSLEDVEIYD-YGKFSKLRSTFNTNYLFPV 454

  Fly   456 SALSWSAFKEQQKLFAFPLFYYSEKLCLKPISFFSFPIRRHLPYRDLFEEHMLQQNEFGLSTYWI 520
            :||.|....|:||||.:.:|||.:..||......|.|:||||||||:||||||.|.||||:.|||
  Fly   455 TALQWFTINEEQKLFKYKIFYYCDAFCLNQFDILSIPLRRHLPYRDIFEEHMLLQKEFGLTKYWI 519

  Fly   521 DRSFSDMVRLKLATMNDFSPPRLEDYIEVSDLSWVFGMYFTGLGISCCCFGLELL 575
            |:|:.||:|..|.|..||||....|||||.:|.|||.|||.|:|:..|.|.||:|
  Fly   520 DQSYRDMIRANLTTFKDFSPLLENDYIEVHNLYWVFTMYFVGMGMGLCFFILEIL 574



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469087
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2C043
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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