DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir52d and glr-8

DIOPT Version :10

Sequence 1:NP_611042.2 Gene:Ir52d / 36716 FlyBaseID:FBgn0050464 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_001368711.1 Gene:glr-8 / 180924 WormBaseID:WBGene00001619 Length:547 Species:Caenorhabditis elegans


Alignment Length:483 Identity:92/483 - (19%)
Similarity:176/483 - (36%) Gaps:123/483 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 ACRLFQERNYEKVYLSEGNPIYVDQFRNMQGALLKSITFNLIPGSMAYRDPKTGQEKHIGY---- 213
            |..|..|:::.   |||           |:|..||.:...:.|..:.|.:.........||    
 Worm    45 AYTLSNEKHFS---LSE-----------MKGRTLKMVVPAIEPPYVNYVNFSDAAVTDKGYGPGV 95

  Fly   214 VANLLNNFVEKVNATLDMQVKLHKAGKKTSFYNITKWASE---------DLVDIG--MSYAAYFE 267
            |..:|....:::|.|.::   |...|.....|....|...         ||:..|  |.|    :
 Worm    96 VMEILKEIGKRLNLTYEI---LPALGSTWGEYLNGSWTGAFGQLVRGEVDLLAGGAIMEY----D 153

  Fly   268 MTNFDTISYPYLMTSTCFMVPLPDMMPNSEIYMGIVDP---PVLVVLIAIF----CIFSVMLNYI 325
            .:....::||:....|..|:..|:...:..:.: :.:|   .|.|:..|:.    .||.||.|.|
 Worm   154 RSVIADLTYPFQFEPTGIMIRSPEKYEDDTLLI-VTEPFSWEVWVITAAVILISGVIFLVMTNII 217

  Fly   326 K-----------QRSWRSLSLVNVLLNDICLRGFLAQPFP-FPRQSNRKLKLISMLVCFFSVITT 378
            :           :..|...|:            |:.|..| .||..:.:     :||..:.:.:.
 Worm   218 RKVYEEMTVTPFESIWVFFSI------------FVQQGLPEQPRSWSCR-----VLVALWWLASI 265

  Fly   379 TMYTSYLQSFMWGPPIDPKMCSFADL-----------------ENS--------RYKLAIRRYDI 418
            |:..::..|.:....:|.....|.::                 |||        |.||.:.| |:
 Worm   266 TLSATFTGSLVALFAVDKTNVPFQNIDQLVRLVKQGKFEIVMDENSFTRTEMIARSKLPVYR-DL 329

  Fly   419 --EMLRPFNVSMDHVVVFDE--SSQLEYLRDSFDDNYMYPMSALSWSAFKEQQKLFAFPLFYYSE 479
              ||:      ::|.|.:..  :..:.::|.:.....:.||:.|::.|:.:.:.:    ||... 
 Worm   330 WHEMI------VNHKVKYVNGIARGVAFVRANPGYALLGPMATLNFYAYSDCKVI----LFNDG- 383

  Fly   480 KLCLKPISFFSFPIRRHLPYRDLFEEHMLQQNEFGLSTYWID--RSFSDMVRLKLATMNDFSPPR 542
               :.|: :.|.|:.::..|...|...:.:..|.|.:..||.  ||:..|.::.........|  
 Worm   384 ---ILPV-YLSIPLVKNSIYSPYFSTKIREMVERGFTQKWIADYRSYVAMQKINECNSTTIGP-- 442

  Fly   543 LEDYIEVSDLSWVFGMYFTGLGISCCCF 570
             :.|:::......|.::..|.|:....|
 Worm   443 -KSYLDLKRAQGAFWVFLGGAGLGLALF 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir52dNP_611042.2 None
glr-8NP_001368711.1 PBP2_iGluR_ligand_binding 62..424 CDD:270219 75/402 (19%)

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