DRSC/TRiP Functional Genomics Resources

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Protein Alignment SRPK and AT4G35500

DIOPT Version :9

Sequence 1:NP_001369087.1 Gene:SRPK / 36706 FlyBaseID:FBgn0286813 Length:1009 Species:Drosophila melanogaster
Sequence 2:NP_974689.1 Gene:AT4G35500 / 829702 AraportID:AT4G35500 Length:439 Species:Arabidopsis thaliana


Alignment Length:641 Identity:196/641 - (30%)
Similarity:261/641 - (40%) Gaps:226/641 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 SSSNESYESETFSDNEDQELMEDYCKGGYHPVNIGDLFH-DRYHVIRKLGWGHFSTVWLCWD-LQ 191
            |||....|.|.|         :.|.|||||.|.|||.|. .||...||||||.||||||.:| |.
plant     5 SSSGSEGEEEGF---------DAYRKGGYHAVRIGDPFSGGRYIAQRKLGWGQFSTVWLAYDTLT 60

  Fly   192 AMGYVAIKIVKSAPHFAETARDEIKILKTVRETDPSNPRRHKTVQMLDDFKITGVNGTHICMVFE 256
            :...:.:.:...|..||:.|..||:.|....:.|....:  ..|:::|.||.:|.||.|:|||.|
plant    61 SNVLLCMFLCLFAQQFAQAALHEIEFLSAAADGDLDKTK--CVVRLIDHFKHSGPNGQHLCMVLE 123

  Fly   257 VLGDNLLKLIRKSNYRGIPLANVKTITRQVLEGLDYLHTCCKIIHTDIKPENVLLCVDEPHVRSL 321
            .|||:||:|||.:.|:|:.|..|:.|.|.:|.||||||....:||:|:||||:|||         
plant   124 FLGDSLLRLIRYNQYKGLKLNKVREICRCILTGLDYLHRELGMIHSDLKPENILLC--------- 179

  Fly   322 ATEATQLYCMNSKMYPSLVSRAPKEYREPPITGKMSKNRKKKLKKKAKKRMELFKQQRDYLEQAD 386
                                                                             
plant   180 ----------------------------------------------------------------- 179

  Fly   387 GQGAINPNEVQNGDAGISDADEYFDANSVEDNVHVAAGQPSRKQREERKAPPEQSEEAQEQDPLT 451
              ..|:|                                                    .:||:.
plant   180 --STIDP----------------------------------------------------AKDPVR 190

  Fly   452 EGTDKAKKKKKKKNKNKSNQSKGQQPPQLENSTSSAESSSALKSQQANGSNSTTNNKSNTNSSGT 516
            .|.                      .|.||....:           |||..||.|...       
plant   191 SGL----------------------TPLLEKPEGN-----------ANGGASTMNLIE------- 215

  Fly   517 LKGQSNGKKMPLRPKQEKQGSNHQLNNNNSKPNSNSDSKISSGSVENTSSATNGPHSNSTLPTPP 581
                   ||:..|.|:                   :.:|||    |...|...|..::|      
plant   216 -------KKLKRRAKR-------------------AVAKIS----ERRVSMVTGEEASS------ 244

  Fly   582 PPPQAKHKAKKDPALDECNVHVKIADLGNACWVDRHFTEDIQTRQYRSLEVIIGAGYNTSADIWS 646
                     |.:.:||..::..|:.|.|||||.|:.|.|:|||||||:.|||:.:||:.|.|:||
plant   245 ---------KTEKSLDGIDMRCKVVDFGNACWADKQFAEEIQTRQYRAPEVILKSGYSFSVDMWS 300

  Fly   647 TACMVFELATGDYLFEPHSGESYTRDEDHLAHIIELLGPIPREILLNGTYAAKSFTRSCELRNIS 711
            ..|..|||.|||.||.|..|..|..||||||.::||||.:||:|.:.|..:...|.|..:|:.|.
plant   301 FGCTAFELVTGDMLFAPKDGNGYGEDEDHLALMMELLGKMPRKIAIGGAKSKDYFDRHGDLKRIR 365

  Fly   712 GLKPWGLMDVLLEKYEWSQKDAASFASFLTPMLEFDPNKRATAAECLQHPWLRXDT 767
            .||.|.|..:|::||:..:.:|..||.||||:|||.|.||.||.:||.|||:. .|
plant   366 RLKYWPLDRLLIDKYKLPEAEAKEFAEFLTPILEFAPEKRPTAQQCLDHPWMNVTT 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SRPKNP_001369087.1 PKc_like 159..>318 CDD:419665 72/160 (45%)
PKc_like <600..763 CDD:419665 82/162 (51%)
AT4G35500NP_974689.1 STKc_SRPK 27..417 CDD:271038 182/604 (30%)
S_TKc 38..417 CDD:214567 176/593 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 201 1.000 Domainoid score I866
eggNOG 1 0.900 - - E1_KOG1290
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D290680at2759
OrthoFinder 1 1.000 - - FOG0000847
OrthoInspector 1 1.000 - - mtm8407
orthoMCL 1 0.900 - - OOG6_100556
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X594
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.780

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