DRSC/TRiP Functional Genomics Resources

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Protein Alignment SRPK and SRPK4

DIOPT Version :9

Sequence 1:NP_001369087.1 Gene:SRPK / 36706 FlyBaseID:FBgn0286813 Length:1009 Species:Drosophila melanogaster
Sequence 2:NP_566977.1 Gene:SRPK4 / 824469 AraportID:AT3G53030 Length:529 Species:Arabidopsis thaliana


Alignment Length:718 Identity:238/718 - (33%)
Similarity:320/718 - (44%) Gaps:213/718 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 ESYESETFSDNEDQELMEDYCKGGYHPVNIGDLFH-DRYHVIRKLGWGHFSTVWLCWDLQAMGYV 196
            |.:.|:......:.|..|||.:||||.|.|||.|. .||.|..||||||||||||.||.|:..||
plant     4 EKWNSDGGEYTSEDEGTEDYRRGGYHAVRIGDSFKTGRYVVQSKLGWGHFSTVWLSWDTQSSRYV 68

  Fly   197 AIKIVKSAPHFAETARDEIKILKTVRETDPSNPRRHKTVQMLDDFKITGVNGTHICMVFEVLGDN 261
            |:|:.|||.|:.|.|.|||.||:.:.|.|..:.:  ..|::||.||.:|.||.|:|||||.||||
plant    69 ALKVQKSAQHYTEAAMDEITILQQIAEGDTDDTK--CVVKLLDHFKHSGPNGQHVCMVFEYLGDN 131

  Fly   262 LLKLIRKSNYRGIPLANVKTITRQVLEGLDYLHTCCKIIHTDIKPENVLLCVDEPHVRSLATEAT 326
            ||.||:.|:|||:|:..||.|...:|.||||||....|||||:|||||||               
plant   132 LLTLIKYSDYRGLPIPMVKEICYHMLVGLDYLHKQLSIIHTDLKPENVLL--------------- 181

  Fly   327 QLYCMNSKMYPSLV--SRAPKEYREPPI------------TGKMSKNRKKKLKKKAKKRMELFKQ 377
                      ||.:  |:.|::...|.:            .|...||:|....:|||...:    
plant   182 ----------PSTIDPSKDPRKSGAPLVLPTDKDNTVVDSNGDFVKNQKTGSHRKAKLSAQ---- 232

  Fly   378 QRDYLEQADGQGAINPNEVQNGDAGISDADEYFDANSVEDNVHVAAGQPSRKQREERKAPPEQSE 442
                 ..|:.:|                       |:..|.|.......:.||....|:      
plant   233 -----GHAENKG-----------------------NTESDKVRGVGSPVNGKQCAAEKS------ 263

  Fly   443 EAQEQDPLTEGTDKAKKKKKKKNKNKSNQSKGQQPPQLENSTSSAESSSALKSQQANGSNSTTNN 507
             .:|..|                                 |||.|                    
plant   264 -VEEDCP---------------------------------STSDA-------------------- 274

  Fly   508 KSNTNSSGTLKGQSNGKKMPLRPKQEKQGSNHQLNNNNSKPNSNSDSKISSGSVENTSSATNGPH 572
               ....|:.||:..|||                                 ||            
plant   275 ---IELDGSEKGKQGGKK---------------------------------GS------------ 291

  Fly   573 SNSTLPTPPPPPQAKHKAKKDPALDECNVHVKIADLGNACWVDRHFTEDIQTRQYRSLEVIIGAG 637
                            ::.:...:...::..|:.|.|||||..:.||.||||||||..|||:|:.
plant   292 ----------------RSSRRHLVASADLKCKLVDFGNACWTYKQFTSDIQTRQYRCPEVILGSK 340

  Fly   638 YNTSADIWSTACMVFELATGDYLFEPHSGESYTRDEDHLAHIIELLGPIPREILLNGTYAAKSFT 702
            |:||||:||.||:.|||.|||.||:||||::|.|||||||.::||||.:||:|.|.|.|:...|.
plant   341 YSTSADLWSFACICFELVTGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSRDFFN 405

  Fly   703 RSCELRNISGLKPWGLMDVLLEKYEWSQKDAASFASFLTPMLEFDPNKRATAAECLQHPWLRXDT 767
            |..:||:|..|:.|.:..||.||||:|::||...:.||..:|:|.|.||.|||:||.|||:....
plant   406 RHGDLRHIRRLRFWPMNKVLTEKYEFSEQDANDLSDFLVSILDFVPEKRPTAAQCLLHPWINSGP 470

  Fly   768 MQPGCWLRATQPATADGDGGALAGTGTGKGTR----ARATALKGGSPAVPA-DGEVGRGYIESSA 827
                   |:.:|:..|.:...|   .|.|..|    ..|..:|.|:..:.: |.:.|.....|:.
plant   471 -------RSIKPSLKDENSDKL---DTEKNKRENEEQEAVEVKMGNVVISSLDSKPGMSQSSSTL 525

  Fly   828 SVA 830
            .:|
plant   526 KLA 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SRPKNP_001369087.1 PKc_like 159..>318 CDD:419665 89/159 (56%)
PKc_like <600..763 CDD:419665 90/162 (56%)
SRPK4NP_566977.1 STKc_SRPK 31..466 CDD:271038 213/617 (35%)
S_TKc 42..466 CDD:214567 207/606 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 201 1.000 Domainoid score I866
eggNOG 1 0.900 - - E1_KOG1290
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H110962
Inparanoid 1 1.050 388 1.000 Inparanoid score I505
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D290680at2759
OrthoFinder 1 1.000 - - FOG0000847
OrthoInspector 1 1.000 - - mtm8407
orthoMCL 1 0.900 - - OOG6_100556
Panther 1 1.100 - - LDO PTHR24055
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X594
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.830

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