DRSC/TRiP Functional Genomics Resources

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Protein Alignment SRPK and si:ch211-220i18.4

DIOPT Version :9

Sequence 1:NP_001369087.1 Gene:SRPK / 36706 FlyBaseID:FBgn0286813 Length:1009 Species:Drosophila melanogaster
Sequence 2:XP_021325577.1 Gene:si:ch211-220i18.4 / 798392 ZFINID:ZDB-GENE-090312-151 Length:448 Species:Danio rerio


Alignment Length:690 Identity:207/690 - (30%)
Similarity:285/690 - (41%) Gaps:267/690 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 ATASTSSGGSAGTPDQYQPPKKTQAKAKPNTQ-------KEHQQQPPRSSSNESYE------SET 139
            :|.....||........:|...:.|:.:.|.:       |.|.....:..|...||      :|.
Zfish    12 STLRRREGGGCRADPIIKPGGASTAELERNPENQHNLLLKSHVVMDSKLKSIRHYEHLEPDLAEE 76

  Fly   140 FSDNEDQELMEDYCKGGYHPVNIGDLFHDRYHVIRKLGWGHFSTVWLCWDLQAMGYVAIKIVKSA 204
            |.|      ..|||.||||||.:||:|:.||.|:.|||||:|||||||.||::..:||:|::||.
Zfish    77 FED------PRDYCYGGYHPVQVGDIFNKRYKVLSKLGWGYFSTVWLCVDLRSGRHVAVKVLKSG 135

  Fly   205 PHFAETARDEIKILKTVRETDPSNPRRHKTVQMLDDFKITGVNGTHICMVFEVLGDNLLKLIRKS 269
            ..|.:..:||:.:|:........||.:.:.||:||:||:.||||.|||:|.|:||.:|.......
Zfish   136 AGFTQAGQDELTLLRCASGPTARNPLKGRIVQLLDEFKLAGVNGIHICLVLELLGPDLRCWQMCF 200

  Fly   270 NYRGIPLANVKTITRQVLEGLDYLHTCCKIIHTDIKPENVLLCVDEPHVRSLATEATQLYCMNSK 334
            ...|:.|:.||.:..||||||:|||:.||||||||||||:|||. .||                 
Zfish   201 GNPGLSLSCVKHVITQVLEGLEYLHSHCKIIHTDIKPENILLCF-TPH----------------- 247

  Fly   335 MYPSLVSRAPKEYREPPITGKMSKNRKKKLKKKAKKRMELFKQQRDYLEQADGQGAINPNEVQNG 399
                           ||                                              .|
Zfish   248 ---------------PP----------------------------------------------GG 251

  Fly   400 DAGISDADEYFDANSVEDNVHVAAGQPSRKQREERKAPPEQSEEAQEQDPLTEGTDKAKKKKKKK 464
            |                                                                
Zfish   252 D---------------------------------------------------------------- 252

  Fly   465 NKNKSNQSKGQQPPQLENSTSSAESSSALKSQQANGSNSTTNNKSNTNSSGTLKGQSNGKKMPLR 529
                           :...:|||..::.||:...:|...|..|..                    
Zfish   253 ---------------IHTYSSSAIRNTVLKAPGESGKLGTWGNLE-------------------- 282

  Fly   530 PKQEKQGSNHQLNNNNSKPNSNSDSKISSGSVENTSSATNGPHSNSTLPTPPPPPQAKHKAKKDP 594
                                                                             
Zfish   283 ----------------------------------------------------------------- 282

  Fly   595 ALDECNVHVKIADLGNACWVDRHFTEDIQTRQYRSLEVIIGAGYNTSADIWSTACMVFELATGDY 659
                 ::.|||||||::|||.:||.::|||||||||||::|:.|..:|||||.||:.|||||||.
Zfish   283 -----DITVKIADLGSSCWVYKHFCQEIQTRQYRSLEVLLGSEYGPAADIWSVACLAFELATGDS 342

  Fly   660 LFEPHSGESYTRDEDHLAHIIELLGPIPREILLNGTYAAKSFTRSCELRNISGLKPWGLMDVLLE 724
            ||||.:|.:::.:||||||||||||.||..:...|.|..:.|.|..:||.|:.|:||||.:||:|
Zfish   343 LFEPKAGPNFSLEEDHLAHIIELLGKIPVSVAQCGKYYYEYFNRKGDLRRIAVLRPWGLYEVLVE 407

  Fly   725 KYEWSQKDAASFASFLTPMLEFDPNKRATAAECLQHPWLR 764
            ||.:..::|:.|:.||..||.:.|.:|||||:||:||||:
Zfish   408 KYHFLLREASLFSDFLLQMLNYLPERRATAAQCLKHPWLK 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SRPKNP_001369087.1 PKc_like 159..>318 CDD:419665 80/158 (51%)
PKc_like <600..763 CDD:419665 91/162 (56%)
si:ch211-220i18.4XP_021325577.1 STKc_SRPK 90..446 CDD:271038 184/603 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D290680at2759
OrthoFinder 1 1.000 - - FOG0000847
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100556
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.880

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