DRSC/TRiP Functional Genomics Resources

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Protein Alignment SRPK and srpk1b

DIOPT Version :9

Sequence 1:NP_001369087.1 Gene:SRPK / 36706 FlyBaseID:FBgn0286813 Length:1009 Species:Drosophila melanogaster
Sequence 2:XP_005155715.1 Gene:srpk1b / 791187 ZFINID:ZDB-GENE-070112-2292 Length:643 Species:Danio rerio


Alignment Length:673 Identity:314/673 - (46%)
Similarity:406/673 - (60%) Gaps:73/673 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 QAKAKPNTQKEHQQQPPRSSSNESYESETFSDNEDQELMEDYCKGGYHPVNIGDLFHDRYHVIRK 175
            :|..:|:.......|.| .:..|..|....||:|:||...||||||||.|.|||||:.|||||||
Zfish    22 RASCRPDPHPRGAAQQP-DALQEQDEEILGSDDEEQEDPNDYCKGGYHHVKIGDLFNGRYHVIRK 85

  Fly   176 LGWGHFSTVWLCWDLQAMGYVAIKIVKSAPHFAETARDEIKILKTVRETDPSNPRRHKTVQMLDD 240
            |||||||||||.||.|...:||:|:||||.|:.|||.||||:||.||.||.::|.|.|.||:|||
Zfish    86 LGWGHFSTVWLAWDTQGKRFVAMKVVKSAEHYTETALDEIKLLKAVRNTDQNDPSREKVVQLLDD 150

  Fly   241 FKITGVNGTHICMVFEVLGDNLLKLIRKSNYRGIPLANVKTITRQVLEGLDYLHTCCKIIHTDIK 305
            |||:||||||:||||||||.:|||.|.||||:|:||..||:|.||||:|||||||.|||||||||
Zfish   151 FKISGVNGTHVCMVFEVLGHHLLKWIIKSNYQGLPLPCVKSIIRQVLQGLDYLHTKCKIIHTDIK 215

  Fly   306 PENVLLCVDEPHVRSLATEATQLYCMNSKMYP---SLVSRAPKEYREPPITGKMSKNRKKKLKKK 367
            |||:|:.|:|.:|:.||.|||:  ...|...|   |.||.||    .|....|||||:|||:|||
Zfish   216 PENILMDVNEAYVKRLAAEATE--WQKSGAPPPSGSAVSTAP----APKQATKMSKNKKKKMKKK 274

  Fly   368 AKKRMELFKQ---QRDYLEQA-DGQGAINPNEVQNGDAGISDADEY----FDANSVEDNVHVAAG 424
            .|::.||.::   :.:.||:. ||....:.:|.:..|:..|....:    ....:..|....|..
Zfish   275 QKRQAELLEKRILEIEGLEKGLDGGEEEDEDETETPDSTPSVPSSHTLQDISTETTLDGTSEAWS 339

  Fly   425 QPSRKQREERKAP-PEQSEEAQEQ-------DPLTEGTDKAKKKKKKKNKNKSNQSKGQQPPQLE 481
            |.:........:| .|||.:.|:|       :|...|.:               .|:...|....
Zfish   340 QVTGSVNGHIPSPEDEQSLDVQQQMKDETPVNPYDSGNE---------------TSEPTNPYPAC 389

  Fly   482 NSTSSAESSSALKSQQANGSNSTTNNKSNTNSSGTLKGQS-NGKKMPLRPKQEKQGSNHQLNNNN 545
            |.|...|.|.|..| .|:|:.:..:....:.......|:| ..:....|.:.|.:.....:   .
Zfish   390 NGTEETEPSPACLS-AADGNGALISGMVESQGCRVQDGESLTAELKDPRAEMEAEPGTQAV---P 450

  Fly   546 SKPNSNSDSKISSGSVENTSSATNGPHSNSTLPTPPPPPQAKHKAKKDPALDECNVHVKIADLGN 610
            .:..|..|:|.::|::               |..|..|..|:            .:.||||||||
Zfish   451 EEEESLKDAKTAAGNL---------------LVNPLEPLNAE------------KIQVKIADLGN 488

  Fly   611 ACWVDRHFTEDIQTRQYRSLEVIIGAGYNTSADIWSTACMVFELATGDYLFEPHSGESYTRDEDH 675
            ||||.:|||:||||||||||||:||.||.|.|||||||||.||||||||||||||||.|:|||||
Zfish   489 ACWVHKHFTDDIQTRQYRSLEVLIGTGYGTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDH 553

  Fly   676 LAHIIELLGPIPREILLNGTYAAKSFTRSCELRNISGLKPWGLMDVLLEKYEWSQKDAASFASFL 740
            :|.||||||.|||::::||.|:.:.||:..:||:|:.||||||.|||:|||||.:::|.:|:.||
Zfish   554 IALIIELLGKIPRKLVMNGKYSKEFFTKKGDLRHITKLKPWGLQDVLVEKYEWHREEAQNFSDFL 618

  Fly   741 TPMLEFDPNKRATAAECLQHPWL 763
            .|||:..|.|||||||||:|.|:
Zfish   619 LPMLDLIPEKRATAAECLRHSWI 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SRPKNP_001369087.1 PKc_like 159..>318 CDD:419665 113/158 (72%)
PKc_like <600..763 CDD:419665 113/162 (70%)
srpk1bXP_005155715.1 PKc_like 70..>256 CDD:304357 126/191 (66%)
S_TKc 80..>224 CDD:214567 104/143 (73%)
PKc_like <465..641 CDD:304357 117/202 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 255 1.000 Domainoid score I2009
eggNOG 1 0.900 - - E1_KOG1290
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H110962
Inparanoid 1 1.050 548 1.000 Inparanoid score I1117
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D290680at2759
OrthoFinder 1 1.000 - - FOG0000847
OrthoInspector 1 1.000 - - otm26464
orthoMCL 1 0.900 - - OOG6_100556
Panther 1 1.100 - - LDO PTHR24055
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2294
SonicParanoid 1 1.000 - - X594
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.860

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