DRSC/TRiP Functional Genomics Resources

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Protein Alignment SRPK and rl

DIOPT Version :10

Sequence 1:NP_001369087.1 Gene:SRPK / 36706 FlyBaseID:FBgn0286813 Length:1009 Species:Drosophila melanogaster
Sequence 2:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster


Alignment Length:172 Identity:54/172 - (31%)
Similarity:82/172 - (47%) Gaps:32/172 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   603 VKIADLGNACWVD-RH-----FTEDIQTRQYRSLEVIIGA-GYNTSADIWSTACMVFELATGDYL 660
            :||.|.|.|...| .|     .||.:.||.||:.|:::.: ||..|.||||..|::.|:.:...:
  Fly   176 LKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 240

  Fly   661 FEPHSGESYTRDEDHLAHIIELLGPIPR---EILLNGTYAAKSFTRSCELR-NISGLKPWGLMDV 721
            |   .|:.|.   |.|.||:.:||...|   |.::|  ..|:::..|...: |:    ||..:  
  Fly   241 F---PGKHYL---DQLNHILGVLGSPSRDDLECIIN--EKARNYLESLPFKPNV----PWAKL-- 291

  Fly   722 LLEKYEWSQKDAASFASFLTPMLEFDPNKRATAAECLQHPWL 763
                  :...||.:. ..|..||.|:|:||....|.|.||:|
  Fly   292 ------FPNADALAL-DLLGKMLTFNPHKRIPVEEALAHPYL 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SRPKNP_001369087.1 Protein Kinases, catalytic domain 159..>318 CDD:473864
Protein Kinases, catalytic domain <600..763 CDD:473864 53/170 (31%)
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 54/172 (31%)
Blue background indicates that the domain is not in the aligned region.

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