DRSC/TRiP Functional Genomics Resources

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Protein Alignment SRPK and srpk1a

DIOPT Version :9

Sequence 1:NP_001369087.1 Gene:SRPK / 36706 FlyBaseID:FBgn0286813 Length:1009 Species:Drosophila melanogaster
Sequence 2:NP_955944.1 Gene:srpk1a / 323679 ZFINID:ZDB-GENE-030131-2399 Length:634 Species:Danio rerio


Alignment Length:697 Identity:321/697 - (46%)
Similarity:420/697 - (60%) Gaps:116/697 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 KKTQAKAKPNTQK-------EHQQQPPRSSS--NESYESETFSDNEDQELMEDYCKGGYHPVNIG 163
            :|.:||||.:|:|       ..|||||.:.:  .|..|....||:|:||...||||||||.|.||
Zfish    11 RKKRAKAKKSTKKPAHPPRGASQQQPPPTETQIQEPDEEILGSDDEEQEDPNDYCKGGYHHVKIG 75

  Fly   164 DLFHDRYHVIRKLGWGHFSTVWLCWDLQAMGYVAIKIVKSAPHFAETARDEIKILKTVRETDPSN 228
            ||.:.:|||||||||||||||||.||:|...:||:|:||||.|:.|||.||||:|::||.|||.:
Zfish    76 DLLNSKYHVIRKLGWGHFSTVWLAWDIQGKRFVAMKVVKSAEHYTETALDEIKLLRSVRNTDPDD 140

  Fly   229 PRRHKTVQMLDDFKITGVNGTHICMVFEVLGDNLLKLIRKSNYRGIPLANVKTITRQVLEGLDYL 293
            |.|...||:||||||:||||||:||||||||.:|||.|.||||:|:||..||:|.||||:|||||
Zfish   141 PNREMVVQLLDDFKISGVNGTHVCMVFEVLGHHLLKWIIKSNYQGLPLPCVKSIIRQVLQGLDYL 205

  Fly   294 HTCCKIIHTDIKPENVLLCVDEPHVRSLATEATQLYCMNSKMYP---SLVSRAPKEYREPPITGK 355
            ||.|:||||||||||:|:.|:|.:||.||.|||:  ...:...|   |.||.||...:.|    |
Zfish   206 HTKCQIIHTDIKPENILMSVEELYVRRLAAEATE--WQKAGAPPPSGSAVSTAPAPKQAP----K 264

  Fly   356 MSKNRKKKLKKKAKKRMELFKQQRDYLEQADGQGAINPNEVQNGDAGISDADEYFDANSVEDNVH 420
            ||||:|||||||.|::.||.::....||           |::.|..|                  
Zfish   265 MSKNKKKKLKKKQKRQAELLEKCIMDLE-----------EMEIGPEG------------------ 300

  Fly   421 VAAGQPSRKQREERKAPPEQSE--------EAQEQDPLTEGTDKAKKKK------KKKNKNKSNQ 471
                      |||.:..||..:        :|..|:..||......:::      .:.|.|....
Zfish   301 ----------REEEEDDPESPKSPSCAPLRQASLQEIATEDIIMDTRERLTSDASVELNCNGCLH 355

  Fly   472 SKGQQPPQLE---------------NSTSSAESSSALKSQQANGSNSTTNNKSNTNSSGTLKGQS 521
            |...||.:.|               |:.:..|.::....:..||:.|...::: ..|:|| .||.
Zfish   356 SSKTQPEEDEQGDLQYGQLLQEDHHNANAGPEDTAQSMYEYCNGAESPELDQA-CYSNGT-SGQE 418

  Fly   522 NGKKMPLRPKQEKQGSNHQLNNNNSKPNSNSDSKISSGSVENTSSATNGPHSNSTLPTPPPPPQA 586
            ..:...|..:::.|..........:| :...|.|:|:||:               |..|..|   
Zfish   419 QLEDGELATEEQHQQKTRTRAREQNK-DKIKDDKLSAGSL---------------LVNPLDP--- 464

  Fly   587 KHKAKKDPALDECNVHVKIADLGNACWVDRHFTEDIQTRQYRSLEVIIGAGYNTSADIWSTACMV 651
                     |:...:.||||||||||||.:||||||||||||||||::|:||||.|||||||||.
Zfish   465 ---------LNADKIKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLLGSGYNTPADIWSTACMA 520

  Fly   652 FELATGDYLFEPHSGESYTRDEDHLAHIIELLGPIPREILLNGTYAAKSFTRSCELRNISGLKPW 716
            ||||||||||||||||.|:|||||:|.||||||.:||:::|.|.|:.:.|::..:|::|:.||||
Zfish   521 FELATGDYLFEPHSGEDYSRDEDHIALIIELLGVVPRKLVLTGKYSKEFFSKKGDLKHITKLKPW 585

  Fly   717 GLMDVLLEKYEWSQKDAASFASFLTPMLEFDPNKRATAAECLQHPWL 763
            ||:|||::||||.|::|.:|:.||.||||..|.||||||:||:||||
Zfish   586 GLLDVLMDKYEWPQEEAQTFSDFLLPMLELLPEKRATAADCLRHPWL 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SRPKNP_001369087.1 PKc_like 159..>318 CDD:419665 109/158 (69%)
PKc_like <600..763 CDD:419665 112/162 (69%)
srpk1aNP_955944.1 PKc_like 72..632 CDD:304357 292/634 (46%)
S_TKc 82..>224 CDD:214567 102/141 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 255 1.000 Domainoid score I2009
eggNOG 1 0.900 - - E1_KOG1290
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H110962
Inparanoid 1 1.050 548 1.000 Inparanoid score I1117
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D290680at2759
OrthoFinder 1 1.000 - - FOG0000847
OrthoInspector 1 1.000 - - otm26464
orthoMCL 1 0.900 - - OOG6_100556
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X594
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.830

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