DRSC/TRiP Functional Genomics Resources

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Protein Alignment SRPK and Srpk3

DIOPT Version :10

Sequence 1:NP_001369087.1 Gene:SRPK / 36706 FlyBaseID:FBgn0286813 Length:1009 Species:Drosophila melanogaster
Sequence 2:XP_006229620.1 Gene:Srpk3 / 293854 RGDID:727856 Length:593 Species:Rattus norvegicus


Alignment Length:697 Identity:304/697 - (43%)
Similarity:393/697 - (56%) Gaps:136/697 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 SKATATATASTSSGGSAGTPDQYQPPKKTQAKAKPNTQKEHQQQPPRSSSNESYESETFSDNEDQ 146
            ::|....|..::|.|.:|..|.......:|....|  :....:..|.:.:....:....||:|:|
  Rat    16 TRALGCDTRMSASAGGSGGMDCGGSSSSSQTSCGP--ESSSSELAPATPAPRLLQGLLGSDDEEQ 78

  Fly   147 ELMEDYCKGGYHPVNIGDLFHDRYHVIRKLGWGHFSTVWLCWDLQAMGYVAIKIVKSAPHFAETA 211
            |..:|||||||:||.|||||:.||||:||||||||||||||||:|...:||:|:||||.|:.|||
  Rat    79 EDPKDYCKGGYYPVKIGDLFNGRYHVVRKLGWGHFSTVWLCWDIQRKRFVALKVVKSAGHYTETA 143

  Fly   212 RDEIKILKTVRETDPSNPRRHKTVQMLDDFKITGVNGTH--ICMVFEVLGDNLLKLIRKSNYRGI 274
            .||||:||.||::|||:|:|...||::|||:|:||||..  :|||.||||..|||.|.||||:|:
  Rat   144 VDEIKLLKCVRDSDPSDPKRETIVQLIDDFRISGVNGVRPDVCMVLEVLGHQLLKWIIKSNYQGL 208

  Fly   275 PLANVKTITRQVLEGLDYLHTCCKIIHTDIKPENVLLCVDEPHVRSLATEATQLYCMNSKMYP-- 337
            |:..||:|.||||.|||||||.||||||||||||:||||.:.::|.||.|||:  ...|...|  
  Rat   209 PVPCVKSIVRQVLHGLDYLHTKCKIIHTDIKPENILLCVGDAYIRRLAAEATE--WQQSGAQPPS 271

  Fly   338 -SLVSRAPKEYREPPITGKMSKNRKKKLKKKAKKRMELFKQQ-RDYLEQADGQGAINPNEVQNGD 400
             |.||.||:|..:   |||:|||::||:::|.|::..|.::: ||.                   
  Rat   272 RSTVSTAPQEVLQ---TGKLSKNKRKKMRRKRKQQKRLLEERLRDL------------------- 314

  Fly   401 AGISDADEYFDANSVEDNVHVAAGQPSRKQREERKAPPEQSEEAQEQDPLTEGTDKAKKKKKKKN 465
                                                   |..||.|....||             
  Rat   315 ---------------------------------------QRLEAMEAAVQTE------------- 327

  Fly   466 KNKSNQSKGQQPPQLENSTSSAESSSALKSQQANGSNSTTNNKSNTNSSGTLKGQSNGKKMP--- 527
                                  :|||.|  :|.:||.|:    |..:..||..|.|.....|   
  Rat   328 ----------------------DSSSRL--EQGSGSTSS----SGCHPEGTRAGPSPASSSPVPT 364

  Fly   528 -----LRPKQEKQGSNHQLNNNNS-KPNSNSDSKISSGSVENTSSATNGPHSNSTLPTPPPPPQA 586
                 |.|..:..|.:..|.:..| ...|.|.::..:|.:.:.|:    |...|.|...|..||.
  Rat   365 GGERSLSPSSQTSGFSGSLFSTASCSVLSGSSNQRETGGLLSPST----PFGASNLLVNPLEPQN 425

  Fly   587 KHKAKKDPALDECNVHVKIADLGNACWVDRHFTEDIQTRQYRSLEVIIGAGYNTSADIWSTACMV 651
            ..|.|           :|||||||||||.:||||||||||||::||:|||.|...|||||||||.
  Rat   426 ADKIK-----------IKIADLGNACWVHKHFTEDIQTRQYRAVEVLIGAEYGPPADIWSTACMA 479

  Fly   652 FELATGDYLFEPHSGESYTRDEDHLAHIIELLGPIPREILLNGTYAAKSFTRSCELRNISGLKPW 716
            ||||||||||||||||.|:|||||:|||:||||.||....|:|.|:.:.|.|..|||:|..||.|
  Rat   480 FELATGDYLFEPHSGEDYSRDEDHIAHIVELLGDIPPAFALSGRYSREFFNRRGELRHIHNLKHW 544

  Fly   717 GLMDVLLEKYEWSQKDAASFASFLTPMLEFDPNKRATAAECLQHPWL 763
            ||.:||:|||||..:.|..|::||.||:|:.|.|||:||:|||||||
  Rat   545 GLYEVLMEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWL 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SRPKNP_001369087.1 Protein Kinases, catalytic domain 159..>318 CDD:473864 109/160 (68%)
Protein Kinases, catalytic domain <600..763 CDD:473864 108/162 (67%)
Srpk3XP_006229620.1 Protein Kinases, catalytic domain 91..591 CDD:473864 281/618 (45%)

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