DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SRPK and dsk1

DIOPT Version :10

Sequence 1:NP_001369087.1 Gene:SRPK / 36706 FlyBaseID:FBgn0286813 Length:1009 Species:Drosophila melanogaster
Sequence 2:NP_595327.1 Gene:dsk1 / 2539847 PomBaseID:SPBC530.14C Length:544 Species:Schizosaccharomyces pombe


Alignment Length:705 Identity:243/705 - (34%)
Similarity:323/705 - (45%) Gaps:177/705 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 SGGSAGTPDQYQP---------PKKTQAKAKPNTQKEHQQQPPRSSSNESYESETFSDNEDQELM 149
            |.||:.:|...||         .:|.....| |..|:...:....|..|..::.       :|..
pombe     3 SDGSSLSPKVSQPGHTEIVDHVSEKVITNGK-NVNKKVNAEVDGKSMVEKVKTH-------EENA 59

  Fly   150 EDYCKGGYHPVNIGDLFHDRYHVI-RKLGWGHFSTVWLCWDLQAMGYVAIKIVKSAPHFAETARD 213
            |||..||||||.||:.||.|.:|: |||||||||||||.:|..|...||:|:|:||.|:.||:.|
pombe    60 EDYHYGGYHPVYIGEEFHHRRYVVERKLGWGHFSTVWLAYDRAAKRRVALKVVRSAEHYRETSID 124

  Fly   214 EIKILKTVRETDPSNPRRHKTVQMLDDFKITGVNGTHICMVFEVLGDNLLKLIRKSNYRGIPLAN 278
            ||:||:.:||.|..:..:...:.:||.|...|.||.|:||||||||:|||.||:...:||:|:..
pombe   125 EIRILQKIREGDEKHLGKKHIISLLDYFVHRGPNGAHVCMVFEVLGENLLSLIQSYGHRGVPVGI 189

  Fly   279 VKTITRQVLEGLDYLHTCCKIIHTDIKPENVLLCVDEPHVRSLATEATQLYCMNSKMYPSLVSRA 343
            ||.|..|:|..|||||..|.|||||:||||||:|:|:..::.:                    .|
pombe   190 VKQIAYQLLIALDYLHRECGIIHTDLKPENVLICIDQDALQHI--------------------EA 234

  Fly   344 PKEYREPPITGKMSKNRKKKLKKKAKKRMELFKQQRDYLEQADGQGAINPNEVQNGDAGISDADE 408
            |.....|......||.|                                                
pombe   235 PATTSSPTSNTSSSKTR------------------------------------------------ 251

  Fly   409 YFDANSVEDNVHVAAGQPSRKQREERKAPPEQSEEAQEQDPLTEGTDKAKKKKKKKNKNKSNQSK 473
                    :|....|..|..|:.:      .....|||            :|...||..|:::..
pombe   252 --------NNTGYTAKAPIIKRGQ------SVDNSAQE------------RKTFAKNPTKNSKPA 290

  Fly   474 GQQPPQLENSTSSAESSSALKSQQANGSNSTTNNKSNTNSSGTLKGQSNGKKMPLRPKQEKQGSN 538
            ||..|      ||..:|:..:.....|:.|                     ::.||..|:     
pombe   291 GQVIP------SSPFTSTLSRFPSLEGAVS---------------------EISLRDSQK----- 323

  Fly   539 HQLNNNNSKPNSNSDSKISSGSVENTSSATNGPHSNSTLPTPPPPPQAKHKAKKDPALDECNVHV 603
                 :||.||    |..|||.........||    |..|.|                   .:.|
pombe   324 -----HNSHPN----SPFSSGDNSLILDGVNG----SQEPVP-------------------KITV 356

  Fly   604 KIADLGNACWVDRHFTEDIQTRQYRSLEVIIGAGYNTSADIWSTACMVFELATGDYLFEPHSGES 668
            ||||||||||..:|||.|:|||||||.|||:|..:..|||.||.||::|||.||||||:|.:|.|
pombe   357 KIADLGNACWTRKHFTNDVQTRQYRSPEVILGCRWGASADCWSFACIIFELLTGDYLFDPRNGNS 421

  Fly   669 YTRDEDHLAHIIELLGPIPREILLNGTYAAKSFTRSCELRNISGLKPWGLMDVLLEKYEWSQKDA 733
            |::::||:|.|||||...|:::.|:|.::...|.|..|||||..||.|.|.|||.:||.:|.:.|
pombe   422 YSKEDDHIAQIIELLVNYPKQMALSGKHSRDLFNRRGELRNIHKLKFWPLKDVLEQKYHFSAELA 486

  Fly   734 ASFASFLTPMLEFDPNKRATAAECLQHPWLRXDTMQPGCWLRATQPATADGDGGA 788
            ...:.||:|||.|||.||..|......|||| :...|...:..|.....|..|.|
pombe   487 QQISDFLSPMLCFDPAKRTNAGYMSNSPWLR-EVADPTFKIETTGATGEDVPGWA 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SRPKNP_001369087.1 Protein Kinases, catalytic domain 159..>318 CDD:473864 87/159 (55%)
Protein Kinases, catalytic domain <600..763 CDD:473864 87/162 (54%)
dsk1NP_595327.1 STKc_SRPK 69..516 CDD:271038 215/604 (36%)

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