DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SRPK and Srpk2

DIOPT Version :9

Sequence 1:NP_001369087.1 Gene:SRPK / 36706 FlyBaseID:FBgn0286813 Length:1009 Species:Drosophila melanogaster
Sequence 2:XP_011248053.1 Gene:Srpk2 / 20817 MGIID:1201408 Length:750 Species:Mus musculus


Alignment Length:837 Identity:342/837 - (40%)
Similarity:445/837 - (53%) Gaps:199/837 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KKRHKNRKRGKQN-----GTNPQEQSNSSQNQNPKPSSNPIPEPNRSSENLQAPDNANNSHLNAP 76
            :|....||:.||.     ..| .|:|:||:...|:..:..:|.|                     
Mouse    21 RKERNIRKKIKQKTELLMSVN-SEKSSSSERPEPQQKAPLVPPP--------------------- 63

  Fly    77 SSAAFSKATATATASTSSGGSAGTPDQYQPPKKTQAKAKPNTQKEHQQQPPRSSSNESYESETFS 141
                                   .|....||....|             ||     |..|....|
Mouse    64 -----------------------PPPPPPPPLPDPA-------------PP-----EPEEEILGS 87

  Fly   142 DNEDQELMEDYCKGGYHPVNIGDLFHDRYHVIRKLGWGHFSTVWLCWDLQAMGYVAIKIVKSAPH 206
            |:|:||...||||||||||.|||||:.|||||||||||||||||||||:|...:||:|:||||.|
Mouse    88 DDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQH 152

  Fly   207 FAETARDEIKILKTVRETDPSNPRRHKTVQMLDDFKITGVNGTHICMVFEVLGDNLLKLIRKSNY 271
            :.|||.||||:||.|||:|||:|.:...||::|||||:|:||.|:||||||||.:|||.|.||||
Mouse   153 YTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNY 217

  Fly   272 RGIPLANVKTITRQVLEGLDYLHTCCKIIHTDIKPENVLLCVDEPHVRSLATEATQLYCMNSKMY 336
            :|:|:..||:|.||||:||||||:.||||||||||||:|:|||:.:||.:|.|||:  ...:...
Mouse   218 QGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATE--WQKAGAP 280

  Fly   337 P---SLVSRAPKEYREPPITGKMSKNRKKKLKKKAKKRMELFKQQRDYLEQADGQGAINPNEVQN 398
            |   |.||.||   ::.|| ||:|||:|||||||.|::.||.:::...:|:.:.:.         
Mouse   281 PPSGSAVSTAP---QQKPI-GKISKNKKKKLKKKQKRQAELLEKRLQEIEELEREA--------- 332

  Fly   399 GDAGISDADEYFDANSVEDNVHVAAGQPSRKQREERKAPPEQSEEAQEQDPLTEGTDK----AKK 459
                        :...:|:|  :.:.:.|.:|::....|....:.|..:|...|.|.|    .:.
Mouse   333 ------------ERKILEEN--ITSAEASGEQQDGEYQPEVTLKAADLEDTTEEETAKDNGEVED 383

  Fly   460 KKKKKNKNKSNQSKGQQPPQLENSTSSAESSSALKSQQANGSNSTTNNKSNTNSSGTLKGQSNGK 524
            :::|::..|.|..|.:.  .:|...::.: .:.::|.:|||...        |...:|:.|...:
Mouse   384 QEEKEDAEKENAEKDED--DVEQELANLD-PTWVESPKANGHIE--------NGPFSLEQQLEDE 437

  Fly   525 KMPLRPKQEKQGSNHQLNNNNSKPNSNSDSKISSGSVENTSSATNGPHSNSTLPTP----PPPPQ 585
            :     ..|...:|.: ..|..:||:.||...||...:......||.|..|..|||    |..|.
Mouse   438 E-----DDEDDCANPE-EYNLDEPNAESDYTYSSSYEQFNGELPNGQHKTSEFPTPLFSGPLEPV 496

  Fly   586 A-------------------KH---------------KAKKDPA------LDECN---VHVKIAD 607
            |                   .|               |.|...|      ||..|   :.|||||
Mouse   497 ACGSVISEGSPLTEQEESSPSHDRSRTVSASSTGDLPKTKTRAADLLVNPLDPRNADKIRVKIAD 561

  Fly   608 LGNACWVDRHFTEDIQTRQYRSLEVIIGAGYNTSADIWSTACMVFELATGDYLFEPHSGESYTRD 672
            |||||||.:|||||||||||||:||:|||||:|.|||||||||.||||||||||||||||.|:||
Mouse   562 LGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRD 626

  Fly   673 EDHLAHIIELLGPIPREILLN-------------------------------GTYAAKSFTRSCE 706
            |||:||||||||.|||...|:                               |.|:.:.|||..|
Mouse   627 EDHIAHIIELLGSIPRHFALSGKYSREFFNRRDHIALIIELLGKVPRKYAMLGKYSKEFFTRKGE 691

  Fly   707 LRNISGLKPWGLMDVLLEKYEWSQKDAASFASFLTPMLEFDPNKRATAAECLQHPWL 763
            ||:|:.||||.|.|||:|||.|..:|||.|..||.||||..|.|||:|.|||:||||
Mouse   692 LRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWL 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SRPKNP_001369087.1 PKc_like 159..>318 CDD:419665 111/158 (70%)
PKc_like <600..763 CDD:419665 118/196 (60%)
Srpk2XP_011248053.1 STKc_SRPK2 103..>291 CDD:271119 123/189 (65%)
2A1904 <338..418 CDD:273344 16/84 (19%)
PKc_like <537..748 CDD:389743 121/210 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 261 1.000 Domainoid score I1947
eggNOG 1 0.900 - - E1_KOG1290
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 566 1.000 Inparanoid score I1071
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000847
OrthoInspector 1 1.000 - - otm43102
orthoMCL 1 0.900 - - OOG6_100556
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2294
SonicParanoid 1 1.000 - - X594
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.750

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