DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SRPK and Srpk1

DIOPT Version :9

Sequence 1:NP_001369087.1 Gene:SRPK / 36706 FlyBaseID:FBgn0286813 Length:1009 Species:Drosophila melanogaster
Sequence 2:NP_058075.2 Gene:Srpk1 / 20815 MGIID:106908 Length:648 Species:Mus musculus


Alignment Length:683 Identity:326/683 - (47%)
Similarity:422/683 - (61%) Gaps:81/683 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 KKTQAKAKPNTQKEHQQQPPRSSSN--ESYESETFSDNEDQELMEDYCKGGYHPVNIGDLFHDRY 170
            ||.:|:.||.||  |:...|.|.|:  |..|....||:::||...||||||||.|.|||||:.||
Mouse    18 KKDKAQRKPETQ--HRGSAPHSESDIPEQEEEILGSDDDEQEDPNDYCKGGYHLVKIGDLFNGRY 80

  Fly   171 HVIRKLGWGHFSTVWLCWDLQAMGYVAIKIVKSAPHFAETARDEIKILKTVRETDPSNPRRHKTV 235
            ||||||||||||||||.||:|...:||:|:||||.|:.|||.|||::||:||.:||::|.....|
Mouse    81 HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNGEMVV 145

  Fly   236 QMLDDFKITGVNGTHICMVFEVLGDNLLKLIRKSNYRGIPLANVKTITRQVLEGLDYLHTCCKII 300
            |:||||||:|||||||||||||||.:|||.|.||||:|:||..||.|.:|||:|||||||.|:||
Mouse   146 QLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRII 210

  Fly   301 HTDIKPENVLLCVDEPHVRSLATEATQLYCMNSKMYP---SLVSRAPKEYREPPITGKMSKNRKK 362
            ||||||||:||.|:|.::|.||.|||:  ...|...|   |.||.||    :|....|||||:||
Mouse   211 HTDIKPENILLSVNEQYIRRLAAEATE--WQRSGAPPPSGSAVSTAP----QPKPADKMSKNKKK 269

  Fly   363 KLKKKAKKRMELFK---QQRDYLEQADGQGAINPNEVQNGDAGISDADEYFDANSVEDNVHVAAG 424
            |||||.|::.||.:   |:.:.:|:..|.|...||:.:..:   |..|.....|           
Mouse   270 KLKKKQKRQAELLEKRMQEIEEMEKESGPGQKRPNKQEESE---SPVDRPLTEN----------- 320

  Fly   425 QPSRKQREERKAPPEQSEEAQEQDPLTEGTDKAKKKKKKKN---------KNKSNQSKGQQPPQL 480
             |..|..:|:.   |:|....:...|||...:....:...|         :|.:|::. :....|
Mouse   321 -PPNKMTQEKL---EESNSIGQDQTLTERGGEGGAPEINCNGVIGVVNYPENSNNETL-RHKEDL 380

  Fly   481 ENST-----SSAESSSALKSQQANGSNSTTNNKSNTNSSGTLKGQSNGKKMPLR---PKQEKQGS 537
            .|:.     :..:..|.|.|...:.|.|...:.....:|.|:..||:.::...|   .:.|:...
Mouse   381 HNANDCDVHTLKQEPSFLNSSNGDSSPSQDTDSCTPTASETMVCQSSAEQSLTRQDITQLEESIR 445

  Fly   538 NHQLNNNNSKPNSNSDS--KISSGSVENTSSATNGPHSNSTLPTPPPPPQAKHKAKKDPALDECN 600
            ....:.:..:||...||  |.|:|:.               |..|..|..|:            .
Mouse   446 ADTPSGDEQEPNGALDSKGKFSAGNF---------------LINPLEPKNAE------------K 483

  Fly   601 VHVKIADLGNACWVDRHFTEDIQTRQYRSLEVIIGAGYNTSADIWSTACMVFELATGDYLFEPHS 665
            :.||||||||||||.:||||||||||||||||:||:||||.|||||||||.||||||||||||||
Mouse   484 LQVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHS 548

  Fly   666 GESYTRDEDHLAHIIELLGPIPREILLNGTYAAKSFTRSCELRNISGLKPWGLMDVLLEKYEWSQ 730
            ||.|||||||:|.||||||.:||::::.|.|:.:.||:..:|::|:.||||||::||:|||||.|
Mouse   549 GEDYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLLEVLVEKYEWPQ 613

  Fly   731 KDAASFASFLTPMLEFDPNKRATAAECLQHPWL 763
            ::||.|..||.||||..|.|||||||||:||||
Mouse   614 EEAAGFTDFLLPMLELMPEKRATAAECLRHPWL 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SRPKNP_001369087.1 PKc_like 159..>318 CDD:419665 110/158 (70%)
PKc_like <600..763 CDD:419665 116/162 (72%)
Srpk1NP_058075.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..57 15/40 (38%)
PKc_like 70..646 CDD:304357 299/627 (48%)
S_TKc 80..>224 CDD:214567 101/143 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..354 40/137 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 395..464 15/68 (22%)
PKc_like <469..>545 CDD:304357 57/102 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 261 1.000 Domainoid score I1947
eggNOG 1 0.900 - - E1_KOG1290
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H110962
Inparanoid 1 1.050 566 1.000 Inparanoid score I1071
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D290680at2759
OrthoFinder 1 1.000 - - FOG0000847
OrthoInspector 1 1.000 - - otm43102
orthoMCL 1 0.900 - - OOG6_100556
Panther 1 1.100 - - LDO PTHR24055
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2294
SonicParanoid 1 1.000 - - X594
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.860

Return to query results.
Submit another query.