Sequence 1: | NP_477023.1 | Gene: | Pms2 / 36705 | FlyBaseID: | FBgn0011660 | Length: | 899 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_958476.2 | Gene: | pms1 / 368631 | ZFINID: | ZDB-GENE-030616-528 | Length: | 896 | Species: | Danio rerio |
Alignment Length: | 979 | Identity: | 245/979 - (25%) |
---|---|---|---|
Similarity: | 417/979 - (42%) | Gaps: | 220/979 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 27 IKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQSVEVSDNGSGVEEMN 91
Fly 92 LEGMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMVIQTRHKSTDVGVKVELDHEGRIK 156
Fly 157 KRSPCARGVGTTVLLANLFSTLPVRRRDF--TRNIKKEFTKMCQILQAYCLVTKGVRILCSNHTP 219
Fly 220 KGAKTIVLQTHGDQEVMANISAIFGARQAADLVPLKSPFGQGQLTEAELRAD---LESGADLADT 281
Fly 282 TSPQISTEDVERLNQADFQLEGFISSCRHGAGRSSRDRQFFFVNSRPCDPKNIAKVMNEVY---- 342
Fly 343 -------HRYNVQQQPFIYLNIITARSDVDVNLTPDKRQLLINNERILLLALKKSLLDTFGQTPA 400
Fly 401 TFQMQNT----TIVSMLEPKTNS-----GKTKFPKESSK--DDQHEEVSEEDVPTTSTQRFMDVL 454
Fly 455 TQW-RRTGDTKGTAPSVPVKRRCSESEELVTRTLKMQKIHTFLSQESPNEQSSKCEAESDAASDV 518
Fly 519 ----------------------DM----AKKDKTQVSLDNSFLNLKELAKESEAYDLLTKPQNTP 557
Fly 558 RIDCKVLTPIKSRRSIFEFKTDAMALDKQESPAELNSQPPSFTQLSEETDIASDEDDHIELPTRI 622
Fly 623 EFDEEMEEGLPSNFSSGEITTSLEEIASSLKAHEQQQRDRRTRTKLQ------RLRFKTEINPNQ 681
Fly 682 NTSAEAEL--QREIDK-----EDFARMEIIGQFNLGFIIVKLEDDLFIVDQHATDEKYNFETLQR 739
Fly 740 TTQ-----------------------LEYQRLAVPQNLELTAVNEMVLL--------NHIDV--- 770
Fly 771 FEKNGFKFEVDHEAPATK------KVRLLGKPHSKRWE------------FGKEDIDELIFMLQD 817
Fly 818 APEGTI--CRPSRVRAMFASRACRKSVMIGTALSRNTTMRRLITQMGEI-EQPWNCPHGRPTMRH 879
Fly 880 LINI 883 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pms2 | NP_477023.1 | MutL | 26..880 | CDD:223400 | 244/974 (25%) |
HATPase_c | 46..>151 | CDD:294057 | 47/104 (45%) | ||
MutL_Trans_hPMS_2_like | 238..381 | CDD:239566 | 42/156 (27%) | ||
MutL_C | 703..847 | CDD:214857 | 34/197 (17%) | ||
pms1 | NP_958476.2 | mutl | 1..320 | CDD:273155 | 126/364 (35%) |
HATPase_c | 24..143 | CDD:280651 | 54/118 (46%) | ||
MutL_Trans_hPMS_1_like | 205..340 | CDD:239567 | 45/175 (26%) | ||
HMGB-UBF_HMG-box | 527..591 | CDD:238686 | 21/96 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D735423at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |