DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pms2 and H12C20.7

DIOPT Version :9

Sequence 1:NP_477023.1 Gene:Pms2 / 36705 FlyBaseID:FBgn0011660 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_001379018.1 Gene:H12C20.7 / 179587 WormBaseID:WBGene00305173 Length:109 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pms2NP_477023.1 MutL 26..880 CDD:223400
HATPase_c 46..>151 CDD:294057
MutL_Trans_hPMS_2_like 238..381 CDD:239566
MutL_C 703..847 CDD:214857
H12C20.7NP_001379018.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D735423at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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