DRSC/TRiP Functional Genomics Resources

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Protein Alignment unc-5 and Unc5a

DIOPT Version :9

Sequence 1:NP_001286450.1 Gene:unc-5 / 36703 FlyBaseID:FBgn0034013 Length:1072 Species:Drosophila melanogaster
Sequence 2:NP_071542.1 Gene:Unc5a / 60629 RGDID:621755 Length:898 Species:Rattus norvegicus


Alignment Length:971 Identity:285/971 - (29%)
Similarity:429/971 - (44%) Gaps:174/971 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 PGEASNTLPIFLIEPESVFVVKNRPAVLKCKASHSLQVIFKCSGS-SQPPPSTHETHVDPHTGVN 183
            ||...:.||.||:|||.|::|||:|.:|.|||..:.|:.|||:|. .:......|...|..:|:.
  Rat    36 PGANPDLLPHFLVEPEDVYIVKNKPVLLVCKAVPATQIFFKCNGEWVRQVDHVIERSTDSSSGLP 100

  Fly   184 MEEVTATIHRDLVDEFFGDGPFKCECHAWSSRGVVKSQAATVHIAYIRKSFNQSPTSLRLELGSR 248
            ..||...:.|..|::.||...:.|:|.||||.|..|||.|.:.|||:||:|.|.|.:..:.|...
  Rat   101 TMEVRINVSRQQVEKVFGLEEYWCQCVAWSSSGTTKSQKAYIRIAYLRKNFEQEPLAKEVSLEQG 165

  Fly   249 AELRCEPPGGFPEPKLTWHKNNAVITADSEPGITVS-AGTLIFRQVALQHMANYSCSAENIAGRR 312
            ..|.|.||.|.|..::.|.:|..::....:|.:.:: ..:|:.||..|...|||:|.|:||..||
  Rat   166 IVLPCRPPEGIPPAEVEWLRNEDLVDPSLDPNVYITREHSLVVRQARLADTANYTCVAKNIVARR 230

  Fly   313 VSDSAVLIVYVNGGWSTWSPWRECKCAGKPSQGR---KRSRTCNNPMPLNGGAQCPGPQIQKSAD 374
            .|.||.:|||||||||||:.|..|..    |.||   ||||:|.||.||||||.|.|..:||:|.
  Rat   231 RSTSAAVIVYVNGGWSTWTEWSVCSA----SCGRGWQKRSRSCTNPAPLNGGAFCEGQNVQKTAC 291

  Fly   375 CAACPEDTQIVSPDGFDISSSKRMARWSAWSDWSICSAECIQVRRRKCLTQGQTQISSEAEEAGD 439
            ...||.|                 ..||:||.||.|..:|...|.|:|                 
  Rat   292 ATLCPVD-----------------GSWSSWSKWSACGLDCTHWRSREC----------------- 322

  Fly   440 LLLGAPGVGMAALIAAAGVGAVGSPSEATGSSSDIIPGYGKSLCAGKDIQTAECRGEQC-QIGKD 503
                                            ||..|..|...|.|.|:.|..|..:.| .....
  Rat   323 --------------------------------SDPAPRNGGEECRGADLDTRNCTSDLCLHTASC 355

  Fly   504 DFDWTLYLGLAFITAVC-----FAFGTALICCARR-GIRTNPHYNMARSVMDADYMP-GVVEKKE 561
            ..|..||:||..: |||     .|.|  ||.|.:: |:.::.   ...|::.:.:.| .:...|.
  Rat   356 PEDVALYIGLVAV-AVCLFLLLLALG--LIYCRKKEGLDSDV---ADSSILTSGFQPVSIKPSKA 414

  Fly   562 MRMHI-----EASNMGYDYV--------NPGHRY-LPGEHIMGMGIGCGGVTEHHYDVPNLSANY 612
            ...|:     :.|.....|.        .|..:: |...|::. .:|.|..|.||          
  Rat   415 DNPHLLTIQPDLSTTTTTYQGSLCSRQDGPSPKFQLSNGHLLS-PLGSGRHTLHH---------- 468

  Fly   613 TNPIDHLSVDYLSETGESSTADTSNSTFDMNGKLSILNASKSSTYEMLGSAGGQLRLYGGELLLF 677
                       .|.|.|:....:..||  .|...|:...:.:..|......||:|.:....:.|.
  Rat   469 -----------SSPTSEAEDFVSRLST--QNYFRSLPRGTSNMAYGTFNFLGGRLMIPNTGISLL 520

  Fly   678 VPEHAIGKHVKKHVSLLLLSDECSRV---SCATESSILCSSVVHSAPRNYSFVKPVILKIPHC-L 738
            :|..||.:.....:.|.|...|..|:   .|.|    |.|.||...|......:||||.:.|| .
  Rat   521 IPPDAIPRGKIYEIYLTLHKPEDVRLPLAGCQT----LLSPVVSCGPPGVLLTRPVILAMDHCGE 581

  Fly   739 VAPEQWHVHIYHADSEHDELSVNWRRAVSVGEETINTPMFVQLEATHVFIMTEQLGHFTVVAEPR 803
            .:|:.|.:.:.....|.     :|...:.:|||:.:...:.||||...::.|||||.|.:|.|..
  Rat   582 PSPDSWSLRLKKQSCEG-----SWEDVLHLGEESPSHLYYCQLEAGACYVFTEQLGRFALVGEAL 641

  Fly   804 IQQPSIKMKLLAFSQHTPPSNANCSLRIYVVKDFPNSRDICANVEAKLGGSFLGESQVFAFTLNS 868
            ....:.:::||.|:. ...::...::|:|.:.|..::......:|.:|||..:.|.:|..|..:.
  Rat   642 SVAATKRLRLLLFAP-VACTSLEYNIRVYCLHDTHDALKEVVQLEKQLGGQLIQEPRVLHFKDSY 705

  Fly   869 RNLNIRVRSADVEAA-------APYEHAIPYQHILS-NNSILHCEFSLRRQDQNS---LCVDFGQ 922
            .||.:.:.  ||.::       ..|:. ||:.||.: ....|||.|:|.|.:.::   .|..:..
  Rat   706 HNLRLSIH--DVPSSLWKSKLLVSYQE-IPFYHIWNGTQQYLHCTFTLERINASTSDLACKVWVW 767

  Fly   923 GSEDDYYTFNIPAHSMSGS--AEELASTTNTTISIDRQGN---YVNESCVMDFVQLPHATKRLIC 982
            ..|.|..:|||..:....:  ||.||        ::.:|.   .|..|.    .::|...::.|.
  Rat   768 QVEGDGQSFNINFNITKDTRFAELLA--------LESEGGVPALVGPSA----FKIPFLIRQKII 820

  Fly   983 GALDPPRADERDWRLLAKKLNTDRYIAYFATKASPTEQILNLWECR--ANSSPGSSSNSVS 1041
            .:||||.:...|||.||:||:.|.::::||:|.|||..||||||.|  .|.:.|..:.:|:
  Rat   821 ASLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSPTAMILNLWEARHFPNGNLGQLAAAVA 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-5NP_001286450.1 I-set 233..321 CDD:254352 29/88 (33%)
Ig 236..321 CDD:299845 28/85 (33%)
TSP1 327..379 CDD:214559 27/54 (50%)
TSP1 401..>422 CDD:214559 10/20 (50%)
ZU5 655..749 CDD:295340 27/97 (28%)
Death_UNC5-like 973..1064 CDD:260051 30/71 (42%)
Unc5aNP_071542.1 I-set 151..239 CDD:254352 29/87 (33%)
Ig 153..239 CDD:299845 28/85 (33%)
TSP1 245..296 CDD:214559 27/54 (50%)
ZU5 495..598 CDD:128514 27/106 (25%)
Interaction with DCC. /evidence=ECO:0000250 661..679 3/17 (18%)
Death_UNC5A 811..894 CDD:260065 30/71 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353244
Domainoid 1 1.000 91 1.000 Domainoid score I7498
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 391 1.000 Inparanoid score I1925
OMA 1 1.010 - - QHG45590
OrthoDB 1 1.010 - - D169564at33208
OrthoFinder 1 1.000 - - FOG0000918
OrthoInspector 1 1.000 - - otm45956
orthoMCL 1 0.900 - - OOG6_102612
Panther 1 1.100 - - O PTHR12582
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X496
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.910

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