DRSC/TRiP Functional Genomics Resources

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Protein Alignment unc-5 and sema5ba

DIOPT Version :10

Sequence 1:NP_611033.2 Gene:unc-5 / 36703 FlyBaseID:FBgn0034013 Length:1072 Species:Drosophila melanogaster
Sequence 2:XP_684379.3 Gene:sema5ba / 556471 ZFINID:ZDB-GENE-070912-187 Length:1101 Species:Danio rerio


Alignment Length:289 Identity:67/289 - (23%)
Similarity:96/289 - (33%) Gaps:118/289 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 CSAENIAGRRVSDSAVLIVYVNGGWSTWSPWRECKCAGKPSQGRKRSRTCNNPMPLNGGAQCPGP 367
            |..:|..|..:.   |.....||||:.||.|.:|..:.:.. ...|.|:||||.|.:||..|.| 
Zfish   600 CGGKNCQGPTIE---VSNCSRN
GGWTPWSSWGQCSTSCEIG-FEVRQRSCNNPSPRHGGRVCVG- 659

  Fly   368 QIQKSADC---AACPEDTQIVSPDGFDISSSKRMARWSAWSDWSICSAEC---IQVRRRKC---- 422
            |.::...|   .:||:.                 ..||:||.||.|||:|   :..|.|.|    
Zfish   660 QSREQRFCNEKVSCPQP-----------------IFWSSWSPWSKCSADCGGGVHSRSRNCENGN 707

  Fly   423 ---------------------------------LTQG---QTQ-----ISSEAEEAGDLLLG--- 443
                                             :|||   |.|     ..::..:..:|.||   
Zfish   708 SCPGCALEYQACNLESCPEVRRNTPWTPWMPVNITQGGARQEQRVRYICRAQLADPHELQLGKRK 772

  Fly   444 -----APGVGMAA---------LIAAAGVGAVGSPSEATGSSS---------DIIPGY------- 478
                 .|..||..         |:...||...|     ||.||         :...||       
Zfish   773 VETRFCPNDGMVTCETDSLVEELLRMPGVRLSG-----TGWSSWEMWSACTQECAKGYRTRKRSC 832

  Fly   479 ----GKSL---CAGKDIQTAECRGEQCQI 500
                ||::   |.|..::..:|..:.|.:
Zfish   833 TNTDGKNIPTACRGSPVEYQDCNPQPCPV 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-5NP_611033.2 Ig 236..321 CDD:472250 4/17 (24%)
Ig strand B 249..253 CDD:409389
Ig strand C 263..267 CDD:409389
Ig strand E 286..290 CDD:409389
Ig strand F 300..305 CDD:409389 1/1 (100%)
Ig strand G 314..317 CDD:409389 0/2 (0%)
TSP1 327..379 CDD:214559 18/54 (33%)
TSP1 401..>422 CDD:214559 12/23 (52%)
ZU5 656..752 CDD:470600
UPA 810..915 CDD:465384
Death_UNC5-like 973..1064 CDD:260051
sema5baXP_684379.3 Sema 72..508 CDD:472829
PSI 509..556 CDD:396154
TSP1 567..618 CDD:214559 4/20 (20%)
TSP1 621..674 CDD:214559 18/54 (33%)
TSP1 679..725 CDD:214559 13/45 (29%)
TSP1 808..860 CDD:214559 9/51 (18%)
TSP1 871..917 CDD:214559
TSP1 920..960 CDD:214559
Blue background indicates that the domain is not in the aligned region.

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