DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unc-5 and Unc5c

DIOPT Version :9

Sequence 1:NP_001286450.1 Gene:unc-5 / 36703 FlyBaseID:FBgn0034013 Length:1072 Species:Drosophila melanogaster
Sequence 2:XP_006233464.1 Gene:Unc5c / 362049 RGDID:735109 Length:950 Species:Rattus norvegicus


Alignment Length:1045 Identity:304/1045 - (29%)
Similarity:446/1045 - (42%) Gaps:212/1045 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 SSSGLGSSGAAGGSGI---LLEEFNSGKLSPGEASNTLPIFLIEPESVFVVKNRPAVLKCKASHS 154
            |:||.||  ||.....   |.|.|      |.:....||.||||||..::|||:|..|.||||.:
  Rat    32 SASGTGS--AAQDDDFFHELPETF------PSDPPEPLPHFLIEPEEAYIVKNKPVNLYCKASPA 88

  Fly   155 LQVIFKCSGSSQPPPSTH--ETHVDPHTGVNMEEVTATIHRDLVDEFFGDGPFKCECHAWSSRGV 217
            .|:.|||: |.......|  :..||..:|:.:.||:..|.|..|:|.||...:.|:|.||||.|.
  Rat    89 TQIYFKCN-SEWVHQKDHVVDERVDETSGLIVREVSIEISRQQVEELFGPEDYWCQCVAWSSAGT 152

  Fly   218 VKSQAATVHIAYIRKSFNQSPTSLRLELGSRAELRCEPPGGFPEPKLTWHKNNAVI--TADSEPG 280
            .||:.|.|.|||:||:|.|.|....:.|.....|:|.||.|.|..::.|.||..:|  ..|....
  Rat   153 TKSRKAYVRIAYLRKTFEQEPLGKEVSLEQEVLLQCRPPEGIPMAEVEWLKNEDIIDPVEDRNFY 217

  Fly   281 ITVSAGTLIFRQVALQHMANYSCSAENIAGRRVSDSAVLIVYVNGGWSTWSPWREC--KCAGKPS 343
            ||:. ..||.:|..|...|||:|.|:||..:|.|.:|.:|||||||||||:.|..|  :| |:..
  Rat   218 ITID-HNLIIKQARLSDTANYTCVAKNIVAKRKSTTATVIVYVNGGWSTWAEWSVCNSRC-GRGY 280

  Fly   344 QGRKRSRTCNNPMPLNGGAQCPGPQIQKSADCAACPEDTQIVSPDGFDISSSKRMARWSAWSDWS 408
            |  ||:|||.||.||||||.|.|..:||.|....||.|                 .||::||.||
  Rat   281 Q--KRTRTCTNPAPLNGGAFCEGQSVQKIACTTLCPVD-----------------GRWTSWSKWS 326

  Fly   409 ICSAECIQVRRRKCLTQGQTQISSEAEEAGDLLLGAPGVGMAALIAAAGVGAVGSPSEATGSSSD 473
            .|..||...|||:|.                                       :|:...|    
  Rat   327 TCGTECTHWRRRECT---------------------------------------APAPKNG---- 348

  Fly   474 IIPGYGKSLCAGKDIQTAECRGEQCQIG--------------------KDDFDWTLYLGLAFITA 518
                 ||. |.|..:|:..|....|..|                    .|..|..||:|:.....
  Rat   349 -----GKD-CDGLVLQSKNCTDGLCMQGFIYPISTEHRTQSEYGFSSAPDSDDVALYVGIVIAVT 407

  Fly   519 VCFAFGTALICCARRGIRTNPHYNMARSVMDADYMPG---VVEKKEMRMHIEASNMGYDYVNPGH 580
            ||.|....:.....|    ..|.:....::|:..:.|   .|..|..|..:.|            
  Rat   408 VCLAITVVVALFVYR----KNHRDFESDIIDSSALNGGFQPVNIKAARQDLLA------------ 456

  Fly   581 RYLPGEHIMGMGIGCGGVTEHHYDV----PNLSANYTNPIDHLSV------------DYLSETGE 629
              :|.:......:..|.|...| ||    |..::...:|:.:|.:            |.|:|...
  Rat   457 --VPPDLTSAAAMYRGPVYALH-DVSDKIPMTNSPILDPLPNLKIKVYNSSGAVTPQDDLAEFSS 518

  Fly   630 SSTADTSNSTFDMNGKLSILNAS-------KSSTYEMLGSAGGQLRLYGGELLLFVPEHAI--GK 685
            ..:...:.|..: |..|::.|.|       ..:.:....|.||.|.:....:.|.:|..||  |:
  Rat   519 KLSPQMTQSLLE-NEALNLKNQSLARQTDPSCTAFGTFNSLGGHLIIPNSGVSLLIPAGAIPQGR 582

  Fly   686 HVKKHVSLLLLSDECSRVSCATESSILCSSVVHSAPRNYSFVKPVILKIPHCLVAP--EQWHVHI 748
            ..:.:|::....:....:.   :|..|.:.||...|......:||||.:.|| ..|  |.|.:.:
  Rat   583 VYEMYVTVHRKENMRPPME---DSQTLLTPVVSCGPPGALLTRPVILTLHHC-ADPNTEDWKIQL 643

  Fly   749 YHADSEHDELSVNWRRAVSVGEETINTPMFVQLEATHVFIMTEQLGHFTVVAEPRIQQPSIKMKL 813
                 ::..:...|...|.||||...||.::||:|....|:||.|..:.:|.:...:..:.::||
  Rat   644 -----KNQAVQGQWEDVVVVGEENFTTPCYIQLDAEACHILTENLSTYALVGQSTTKAAAKRLKL 703

  Fly   814 LAFSQHTPP---SNANCSLRIYVVKDFPNSRDICANVEAKLGGSFLGESQVFAFTLNSRNLNIRV 875
            ..|.    |   |:...|:|:|.:.|..::......:|.::||..|.|.:...|..:..||.:.:
  Rat   704 AIFG----PLCCSSLEYSIRVYCLDDTQDALKEVLQLERQMGGQLLEEPKALHFKGSIHNLRLSI 764

  Fly   876 RSADV-------EAAAPYEHAIPYQHILSNNS-ILHCEFSLRRQDQNS------LCVDFGQGSED 926
            .  |:       :..|.|:. ||:.||.|.:. .|||.|:|.|...|:      |||...:| |.
  Rat   765 H--DITHSLWKSKLLAKYQE-IPFYHIWSGSQRNLHCTFTLERLSLNTVELVCKLCVRQVEG-EG 825

  Fly   927 DYYTFNIP-AHSMSGSAEELASTTNTTISIDRQGNYVNESCVMDFVQLPHATKRLICGALDPPRA 990
            ..:..|.. :...:|....|....:|..::.....:          .:|...::.:|.:||.|:.
  Rat   826 QIFQLNCTVSEEPTGIDLPLLDPASTITTVTGPSAF----------SIPLPIRQKLCSSLDAPQT 880

  Fly   991 DERDWRLLAKKLNTDRYIAYFATKASPTEQILNLWECRANSSPGSSSNSVSHTIMALLLTLKEMG 1055
            ...|||:||.|||.|||:.|||||:|||..||:|||.: |...|:.|        .|...|:|||
  Rat   881 RGHDWRMLAHKLNLDRYLNYFATKSSPTGVILDLWEAQ-NFPDGNLS--------MLAAVLEEMG 936

  Fly  1056 RQDVL 1060
            |.:.:
  Rat   937 RHETV 941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-5NP_001286450.1 I-set 233..321 CDD:254352 31/89 (35%)
Ig 236..321 CDD:299845 30/86 (35%)
TSP1 327..379 CDD:214559 27/53 (51%)
TSP1 401..>422 CDD:214559 11/20 (55%)
ZU5 655..749 CDD:295340 24/97 (25%)
Death_UNC5-like 973..1064 CDD:260051 38/88 (43%)
Unc5cXP_006233464.1 I-set 169..257 CDD:254352 31/88 (35%)
Ig 171..257 CDD:299845 30/86 (35%)
TSP1 263..314 CDD:214559 27/53 (51%)
TSP1 319..367 CDD:214559 20/96 (21%)
ZU5 547..650 CDD:128514 24/111 (22%)
Death_UNC5C 863..945 CDD:260064 38/88 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353240
Domainoid 1 1.000 91 1.000 Domainoid score I7498
eggNOG 1 0.900 - - E1_KOG1480
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2765
Inparanoid 1 1.050 391 1.000 Inparanoid score I1925
OMA 1 1.010 - - QHG45590
OrthoDB 1 1.010 - - D169564at33208
OrthoFinder 1 1.000 - - FOG0000918
OrthoInspector 1 1.000 - - otm45956
orthoMCL 1 0.900 - - OOG6_102612
Panther 1 1.100 - - LDO PTHR12582
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X496
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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