DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unc-5 and unc5d

DIOPT Version :10

Sequence 1:NP_611033.2 Gene:unc-5 / 36703 FlyBaseID:FBgn0034013 Length:1072 Species:Drosophila melanogaster
Sequence 2:XP_002933002.2 Gene:unc5d / 100490873 XenbaseID:XB-GENE-922923 Length:950 Species:Xenopus tropicalis


Alignment Length:1027 Identity:286/1027 - (27%)
Similarity:438/1027 - (42%) Gaps:199/1027 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 NSGKLSP---GEASNTLPIFLIEPESVFVVKNRPAVLKCKASHSLQVIFKCSGSSQPPPSTH--E 173
            |:|::.|   ..|..|||.||:||:..::||:.|..|:|:|..::|:.|||:| .....|.|  |
 Frog    34 NNGEVLPESLPSAPGTLPHFLMEPDDAYIVKSNPIHLRCRAMPAMQIFFKCNG-EWVHQSEHVSE 97

  Fly   174 THVDPHTGVNMEEVTATIHRDLVDEFFGDGPFKCECHAWSSRGVVKSQAATVHIAYIRKSFNQSP 238
            ..||..||:.:.||...:.|..|::|.|...:.|:|.|||:.|..||:.|.|.|||:||:|.|.|
 Frog    98 ESVDEATGLKIREVYINVTRQQVEDFHGSEDYWCQCIAWSNLGTSKSRRAFVRIAYLRKNFEQDP 162

  Fly   239 TSLRLELGSRAELRCEPPGGFPEPKLTWHKNNAVITADSEPGI-TVSAGTLIFRQVALQHMANYS 302
            ....:.:.:...|.|.||.|.|..::.|.||..:|.:..:..| |.::..||.||..|....||:
 Frog   163 KGKEVLIDTMIVLHCRPPEGIPTAEVEWLKNEELIDSLMDENIDTRASHNLIIRQARLSDSGNYT 227

  Fly   303 CSAENIAGRRVSDSAVLIVYVNGGWSTWSPWREC--KCAGKPSQGRKRSRTCNNPMPLNGGAQCP 365
            |.|.||..:|.|.||.:||:|:||||:|:.|..|  :| ||..|  ||||||.||.|||||..|.
 Frog   228 CVASNIVAKRRSASATVIVFVHGGWSSWAEWSACNVRC-GKGFQ--KRSRTCTNPAPLNGGTFCD 289

  Fly   366 GPQIQKSADCAACPEDTQIVSPDGFDISSSKRMARWSAWSDWSICSAECIQVRRRKCLTQGQTQI 430
            ||.:||....|.||.|                 ..|..||:||:||.||.|.|.|||:..     
 Frog   290 GPSVQKITCNALCPVD-----------------GNWDVWSEWSVCSPECEQQRDRKCIAP----- 332

  Fly   431 SSEAEEAGDLLLGAPGVGMAALIAAAGVGAVGSPSEATGSSSDIIPGYGKSLCAGKDIQTAECRG 495
                         ||.:|             |.|.|.....|:   ...:.||..:.....|.|.
 Frog   333 -------------APTIG-------------GKPCEGLSQESE---NCTEGLCIQEKKPLHEIRP 368

  Fly   496 EQCQIGKDDFDWTLY--LGLAFITAVCFAFGTALICCARRGIRTNPHYNMARSVMDADYMPGVVE 558
               |..::..|..||  ||.|.|.......|..|             |..::|    :|...|::
 Frog   369 ---QSAENASDIALYSGLGAAIIAVAVLVVGITL-------------YRRSQS----EYGVDVID 413

  Fly   559 KKEMRMHIEASNMGYDYVNPGHRYLPGEHIMGMGIGCGGVTEHHYDVPNLSANYT---------- 613
            ...:....:..|  :..|..|:..|....:.                |:|:.:.|          
 Frog   414 SSALTGGFQTFN--FKTVRQGNSLLLNSSLQ----------------PDLTVSRTYSGPICFQDP 460

  Fly   614 ------------NPIDHLSV----------------DYLSETGESSTADTSN---STFDMNGKLS 647
                        ||:..:.|                |:..:|...|....:|   .|.....||.
 Frog   461 MDKELMTESSIFNPLTDIKVKVQSSFMVSLGVTDRPDFQGKTISGSFPHGNNRCFGTLHNRNKLP 525

  Fly   648 ILN--ASKSSTYEM-----LGSAGGQLRLYGGELLLFVPEHAIGKHVKKHVSLLLLSDECSRVSC 705
            .:.  .|.||..||     .|..||:|.:....:.|.:|..||.:.....:.|::...|.|....
 Frog   526 YIQNLTSISSKPEMRASGHFGHQGGRLVMPNTGVSLLIPHKAIAEDNSWEIFLIVNQGEPSLPLE 590

  Fly   706 ATESSILCSSVVHSAPRNYSFVKPVILKIPHCL-VAPEQWHVHIYHADSEHDELSVNWRRAVSVG 769
            ..|  :|....|...|.:.:...||.|.||||. |:.|.|::.:.....:.     .|...:|:.
 Frog   591 GAE--VLLGPEVTCGPFDINLSTPVALTIPHCAEVSCEHWNIRLKRRSQQG-----KWEEIMSLD 648

  Fly   770 EETINTPMFVQLEATHVFIMTEQLGHFTVVAEPRIQQPSIKMKLLAFSQHTPPSNANCSLRIYVV 834
            :||  |..:..|:.....|:.:..|.:.:|.||.......::|:..|...: .::.:.:||:|.:
 Frog   649 DET--TSFYCLLDPFSCHILLDSFGTYALVGEPLTDCAVKELKVAVFGCMS-CNSLDYNLRVYCI 710

  Fly   835 KDFPNS-RDICANVEAKLGGSFLGESQVFAFTLNSRNLNIRVRSADVE----AAAPYE--HAIPY 892
            .:.|.: :::.:| |...||..|.|.::..|..|:.::.|.|  .|:.    ...|:.  ..:|:
 Frog   711 DNTPCAFQEVLSN-ERHQGGQLLEEPKLLHFKGNTFSIQISV--LDIPPFLWRIKPFTACQEVPF 772

  Fly   893 QHI-LSNNSILHCEFSLRR------QDQNSLCVDFGQGSEDDYYTFNIPAHSMSGSAEELASTTN 950
            ..: .||...|||.|||.|      |....:||...:|.|   ....:....:....|.:|    
 Frog   773 SRVWCSNQQPLHCAFSLERYTPATTQLSCKICVRQVKGHE---LILQVQTSILENERETIA---- 830

  Fly   951 TTISIDRQGNYVNESCVMDFVQLPHATKRLICGALDPPRADERDWRLLAKKLNTDRYIAYFATKA 1015
              .......|:...:....| ::||:.::.||...|.|.:..:||:|||:||:.:|.::|||||.
 Frog   831 --FFAPEDSNFPAHTGPKAF-KIPHSIRQRICATFDTPNSKGKDWQLLAQKLSINRNLSYFATKN 892

  Fly  1016 SPTEQILNLWECRANSSPGSSSNSVSHTIMALLLTLKEMGR-QDVLDIIVET 1066
            ||:..||:|||.|         ......:.:|...|:|:|| |:.|.::.||
 Frog   893 SPSAVILDLWEAR---------YPYDGNLDSLACALEEIGRTQNKLSLVTET 935

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-5NP_611033.2 Ig 236..321 CDD:472250 29/85 (34%)
Ig strand B 249..253 CDD:409389 1/3 (33%)
Ig strand C 263..267 CDD:409389 0/3 (0%)
Ig strand E 286..290 CDD:409389 1/3 (33%)
Ig strand F 300..305 CDD:409389 3/4 (75%)
Ig strand G 314..317 CDD:409389 1/2 (50%)
TSP1 327..379 CDD:214559 28/53 (53%)
TSP1 401..>422 CDD:214559 12/20 (60%)
ZU5 656..752 CDD:470600 27/101 (27%)
UPA 810..915 CDD:465384 29/118 (25%)
Death_UNC5-like 973..1064 CDD:260051 34/91 (37%)
unc5dXP_002933002.2 Ig 160..246 CDD:472250 29/85 (34%)
Ig strand B 173..177 CDD:409353 1/3 (33%)
Ig strand C 187..191 CDD:409353 0/3 (0%)
Ig strand E 211..215 CDD:409353 1/3 (33%)
Ig strand F 225..230 CDD:409353 3/4 (75%)
Ig strand G 239..242 CDD:409353 1/2 (50%)
TSP1 252..303 CDD:214559 28/53 (53%)
TSP1 308..356 CDD:214559 21/81 (26%)
ZU5 541..636 CDD:459941 25/96 (26%)
UPA 684..823 CDD:465384 33/145 (23%)
DD 850..947 CDD:472698 36/95 (38%)

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