DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unc-5 and unc5c

DIOPT Version :9

Sequence 1:NP_001286450.1 Gene:unc-5 / 36703 FlyBaseID:FBgn0034013 Length:1072 Species:Drosophila melanogaster
Sequence 2:XP_004911160.2 Gene:unc5c / 100485730 XenbaseID:XB-GENE-921628 Length:951 Species:Xenopus tropicalis


Alignment Length:1061 Identity:307/1061 - (28%)
Similarity:449/1061 - (42%) Gaps:218/1061 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 GLGSSGAAGGSGILLEEFNSGKLS-----------------------PGEASNTLPIFLIEPESV 137
            |:.::....|.|.:|:.|....|:                       |.:....||.||||||..
 Frog     4 GMETASCGVGLGCILQLFFLPALAILSAGSTLAAQDDDFFHELPETFPSDPPEPLPHFLIEPEEA 68

  Fly   138 FVVKNRPAVLKCKASHSLQVIFKCSGS--SQPPPSTHETHVDPHTGVNMEEVTATIHRDLVDEFF 200
            ::|||:|..|.||||.:.|:.|||:..  .|.....:| .||..:|:.:.||:..|.|..|:|.|
 Frog    69 YIVKNKPVNLYCKASPATQIYFKCNSEWVHQKDHVVNE-KVDETSGLIVREVSIEISRQQVEELF 132

  Fly   201 GDGPFKCECHAWSSRGVVKSQAATVHIAYIRKSFNQSPTSLRLELGSRAELRCEPPGGFPEPKLT 265
            |...:.|:|.||||.|..||:.|.|.|||:||:|.|.|....:.|.....|:|.||.|.|..::.
 Frog   133 GLEDYWCQCVAWSSAGTTKSRKAYVRIAYLRKTFEQEPLGKEVSLEQEVLLQCRPPEGIPGAEVE 197

  Fly   266 WHKNNAVI--TADSEPGITVSAGTLIFRQVALQHMANYSCSAENIAGRRVSDSAVLIVYVNGGWS 328
            |.||..||  ..|....||:. ..||.:|..|...|||:|.|:||.|:|.|.:|.:|||||||||
 Frog   198 WLKNEDVIDPVEDRNFYITID-HNLIIKQARLSDTANYTCVAKNIVGKRRSTTATVIVYVNGGWS 261

  Fly   329 TWSPWREC--KCAGKPSQGRKRSRTCNNPMPLNGGAQCPGPQIQKSADCAACPEDTQIVSPDGFD 391
            ||:.|..|  :| ||..|  ||:|||.||.|||||..|.|..:||.|..:.||||          
 Frog   262 TWTEWSACSNRC-GKGYQ--KRTRTCTNPAPLNGGYICEGQGVQKMACTSLCPED---------- 313

  Fly   392 ISSSKRMARWSAWSDWSICSAECIQVRRRKCLTQGQTQISSEAEEAGDLLLGAPGVGMAALIAAA 456
                   ..|:|||.||.|..||...|||.|                                  
 Frog   314 -------GEWTAWSKWSTCGTECTHWRRRDC---------------------------------- 337

  Fly   457 GVGAVGSPSEATGSSSDIIPGYGKSLCAGKDIQTAECRGEQCQIG--------------KDDFDW 507
                 .:|....|         ||. |.|..:|:..|....|..|              :.::::
 Frog   338 -----ANPPPRNG---------GKD-CDGPVLQSKNCTDGLCMQGLIYPHSPRIHEQKTQKEYEY 387

  Fly   508 T---------LYLGLAFITAVCFAFGTALICCARRGIRTNPHYNMARSVMDADYMPGVVEKKEMR 563
            :         ||:|:.....||.|....:.....|    ..|......::|...:.|..:    .
 Frog   388 SSAPSSDNVALYVGIVIAVIVCLAISVIVALFVYR----KNHRGFESDIIDTSALNGGFQ----A 444

  Fly   564 MHIEASNMGYDYVNPGHRYLPGEHIMGMGIGCGGVTEHHYDV---------------PNL----- 608
            ::|:|:..  |.:.     :|.:......:..|.|...| ||               |||     
 Frog   445 VNIKAARQ--DLLG-----VPPDLTSAAAMYRGPVYALH-DVSDKIPMTNSPLLDPLPNLKIKVY 501

  Fly   609 -SANYTNPIDHLSVDYLSETGESSTAD-TSNSTFDM-NGKLSILNASKSSTYEMLGSAGGQLRLY 670
             |:....|.|.|| ||.|:.....|.. ..|.|.:| |..|:.......:.:....|.||.|.:.
 Frog   502 NSSGTVTPQDDLS-DYTSKLSSQITQSLLENDTLNMKNQSLARQTDPSCTAFGTFNSLGGHLIIP 565

  Fly   671 GGELLLFVPEHAI--GKHVKKHVSLLLLSDECSRVSCATESSILCSSVVHSAPRNYSFVKPVILK 733
            ...:.|.:|..|:  |:..:.:|::....:....:.   :|..|.:.||...|......:||||.
 Frog   566 NSGVSLLIPAGAVPQGRVYEMYVTVHRKENMRPPIE---DSQTLLTPVVSCGPPGALMTRPVILT 627

  Fly   734 IPHCL-VAPEQWHVHIYHADSEHDELSVNWRRAVSVGEETINTPMFVQLEATHVFIMTEQLGHFT 797
            :.||. ...|.|.:.:     :...:...|...|.||||...||.::|:|:....|:||.|..:.
 Frog   628 MHHCAETTAEDWKMQL-----KEQSVQGQWEDVVFVGEENFTTPCYIQMESEACHILTETLSTYA 687

  Fly   798 VVAEPRIQQPSIKMKLLAFSQHTPPSNANCSLRIYVVKDFPNSRDICANVEAKLGGSFLGESQVF 862
            :|.:...:..:.::||..|.. |..::...::|:|.:.|..::.......|.|:||..|.|.:..
 Frog   688 LVGQSTSKSSAKRLKLALFGP-TSCTSLEYNIRVYCLDDTQDALKEVIQQERKVGGQLLDEPKTL 751

  Fly   863 AFTLNSRNLNIRVRSADV-------EAAAPYEHAIPYQHILSN-NSILHCEFSLRRQDQNS---- 915
            .|..::.||.:.:.  ||       :..|.|:. ||:.||.|. ...|||.|:|.|...::    
 Frog   752 HFKGSTHNLRLSIH--DVPHSLWKSKLLAKYQE-IPFYHIWSGCQRNLHCTFTLERFSLSTVELV 813

  Fly   916 --LCVDFGQGSEDDYYTFNIPAHSMSGSAEEL----ASTTNTTISIDRQGNYVNESCVMDFVQLP 974
              |||...:| |...:..|..|.....|..:|    :::|.|||        |..|.    ..:|
 Frog   814 CKLCVRQVEG-EGQIFQLNCTASEEPSSIIDLPLMDSASTITTI--------VGPSA----FSIP 865

  Fly   975 HATKRLICGALDPPRADERDWRLLAKKLNTDRYIAYFATKASPTEQILNLWECRANSSPGSSSNS 1039
            ...::.:|.:||.|:....|||:||.||..|||:.|||||.|||..||:|||.: |...|:.|  
 Frog   866 LTIRQKLCSSLDAPQTRGHDWRMLAHKLKLDRYLNYFATKPSPTGVILDLWEAQ-NYPEGNLS-- 927

  Fly  1040 VSHTIMALLLTLKEMGRQDVL 1060
                  .|...|:||||.:.:
 Frog   928 ------TLAAVLEEMGRHETM 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-5NP_001286450.1 I-set 233..321 CDD:254352 33/89 (37%)
Ig 236..321 CDD:299845 32/86 (37%)
TSP1 327..379 CDD:214559 27/53 (51%)
TSP1 401..>422 CDD:214559 12/20 (60%)
ZU5 655..749 CDD:295340 22/96 (23%)
Death_UNC5-like 973..1064 CDD:260051 37/88 (42%)
unc5cXP_004911160.2 Ig 168..254 CDD:416386 32/86 (37%)
Ig strand A' 172..176 CDD:409353 0/3 (0%)
Ig strand B 180..187 CDD:409353 2/6 (33%)
Ig strand C 195..200 CDD:409353 1/4 (25%)
Ig strand C' 202..205 CDD:409353 0/2 (0%)
Ig strand D 211..216 CDD:409353 0/4 (0%)
Ig strand E 219..225 CDD:409353 2/5 (40%)
Ig strand F 232..240 CDD:409353 5/7 (71%)
Ig strand G 243..254 CDD:409353 4/10 (40%)
TSP1 260..311 CDD:214559 27/53 (51%)
TSP1 316..364 CDD:214559 21/96 (22%)
ZU5 547..650 CDD:128514 22/110 (20%)
UPA 698..836 CDD:407337 38/142 (27%)
DD 864..946 CDD:417479 37/88 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 94 1.000 Domainoid score I7329
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H2765
Inparanoid 1 1.050 392 1.000 Inparanoid score I1941
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D169564at33208
OrthoFinder 1 1.000 - - FOG0000918
OrthoInspector 1 1.000 - - otm49043
Panther 1 1.100 - - LDO PTHR12582
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X496
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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