DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr51 and nr2f6

DIOPT Version :10

Sequence 1:NP_611032.2 Gene:Hr51 / 36702 FlyBaseID:FBgn0034012 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001004841.1 Gene:nr2f6 / 448119 XenbaseID:XB-GENE-480818 Length:389 Species:Xenopus tropicalis


Alignment Length:503 Identity:149/503 - (29%)
Similarity:210/503 - (41%) Gaps:162/503 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 NSMNHSSAAEGSSMTRIKGQ----NLGLICVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIYR 146
            ||....::.:|......:|.    .:.:.||||||.|||||||:..|.||..||||||||.|.|.
 Frog    25 NSEEEEASPQGGMSDPEQGDEERPGIQVDCVVCGDKSSGKHYGVFTCEGCKSFFKRSVRRNLSYT 89

  Fly   147 CQAGTGRCVVDKAHRNQCQACRLKKCLQMGMNKDAVQNERQPRNTATIRPETLREMEHGRALREA 211
            |::... |.:|:.||||||.||||||.::||.|:|||.                           
 Frog    90 CRSNRD-CQIDQHHRNQCQYCRLKKCFRVGMRKEAVQR--------------------------- 126

  Fly   212 AVAVGVFGPPVLLSPPCYGSGLLPPPSLGSLPTGRLLHHNHLTSSMQLAANHMGAGSFPMFNAAG 276
                                |.:||....:.||                 :..|||.:  ||   
 Frog   127 --------------------GRIPPAHSSASPT-----------------SAPGAGEY--FN--- 149

  Fly   277 VHHSPKEKAYGMEMATSGNVSHSTNSSSNHSIDPSSPAPENAKEINIAGGSVSSVSSSSPTMEND 341
                                              ..|..|...::..|                 
 Frog   150 ----------------------------------GQPVSELISQLLRA----------------- 163

  Fly   342 NDDDSIDVTNDNEEPHAVSRSDSSFIMPQFMSPNLYTHQH-----ETVYETSARLLFMAVKWAKN 401
                         ||:..||..|.           |..|.     :.:.|.:|||||..|:|::|
 Frog   164 -------------EPYPASRYGSQ-----------YAQQGSVMGIDNICELAARLLFSTVEWSRN 204

  Fly   402 LPSFARLSFRDQVILLEESWSELFLLNAIQWCIPLDPTGCALFSVAEHCNNLENNANGDTCITKE 466
            :|.|..|:..|||.||..||||||:|:|.|..:||. ....|.:...|.:.:    :.|..::  
 Frog   205 IPYFPELAMADQVSLLRLSWSELFVLSAAQSALPLH-MAPLLAAAGFHASPM----SADRVVS-- 262

  Fly   467 ELAADVRTLHEIFCKYKAVLVDPAEFACLKAIVLFRPETRGLKDPAQIENLQDQAHVMLSQHTKT 531
             ....:|...:...|...:.||.||:||||||.||..:..||.|||.:|:||::|.|.|:::.:.
 Frog   263 -FMDQIRLFQDQVEKLNRLQVDSAEYACLKAIALFTSDACGLTDPAHVESLQEKAQVALTEYVRA 326

  Fly   532 QFTAQIARFGRLLLMLPLLRMISSHKIESIYFQRTIGNTPMEKVLCDM 579
            |:.:|..|||||||.||.||.:.:..|..::|.|.:|.||:|.::.||
 Frog   327 QYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRLVGKTPIETLIRDM 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr51NP_611032.2 NR_DBD_PNR 103..194 CDD:143528 48/94 (51%)
NR_LBD_Tlx_PNR_like 354..569 CDD:132748 79/219 (36%)
nr2f6NP_001004841.1 NR_DBD_COUP_TF 54..126 CDD:143516 46/72 (64%)
NR_LBD_COUP-TF 152..388 CDD:132746 88/272 (32%)

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