DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr51 and nr2e1

DIOPT Version :9

Sequence 1:NP_611032.2 Gene:Hr51 / 36702 FlyBaseID:FBgn0034012 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001003608.1 Gene:nr2e1 / 445214 ZFINID:ZDB-GENE-040801-127 Length:396 Species:Danio rerio


Alignment Length:487 Identity:167/487 - (34%)
Similarity:246/487 - (50%) Gaps:127/487 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 LGLICVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIYRCQAGT-GRCVVDKAHRNQCQACRLK 170
            |.:.|.||||.|||||||:.||:|||||||||:||...|.|::|| |.|.|||.|||||:|||||
Zfish    23 LDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGTQGGCPVDKTHRNQCRACRLK 87

  Fly   171 KCLQMGMNKDAVQNERQPRNTATIRPETLREMEHGRALREAAV---AVGVFGPPVLLSPPCYGSG 232
            |||::.|||||||:||.|| |:|||.:........:.:..::.   :..:.|||           
Zfish    88 KCLEVNMNKDAVQHERGPR-TSTIRKQVALYFRGHKEVNGSSTHFPSTSIPGPP----------- 140

  Fly   233 LLPPPSLGSLPTGRLLHHNHLTSSMQLAANHMGAGSFPMFNAAGVHHSPKEKAYGMEMATSGNVS 297
                               ..|:..||                        :.:.:|:    |..
Zfish   141 -------------------FFTTVTQL------------------------EPHNLEL----NTV 158

  Fly   298 HSTNSSSNHSIDPSSPAPENAKEINIAGGSVSSVSSSSPTMENDNDDDSIDVTNDNEEPHAVSRS 362
            .||              ||....:.:|          .||               .:.||.||.:
Zfish   159 TST--------------PERQAIVGLA----------QPT---------------PKYPHEVSGT 184

  Fly   363 DSSFIMPQFMSPNLYTHQHETVYETSARLLFMAVKWAKNLPSFARLSFRDQVILLEESWSELFLL 427
                  |.:    ||....|:|.|::||||||::||||::|:|:.|...||:||||::|.|||:|
Zfish   185 ------PMY----LYEVATESVCESAARLLFMSIKWAKSVPAFSTLPLPDQLILLEDAWRELFVL 239

  Fly   428 NAIQWCIPLDPTGCALFSVAEHCNNLENNANGDTCITKEELAADVRTLHEIFCKYKAVLVDPAEF 492
            ...||.||:|.:  .|.:|:.     .|..|.|: ....::.::::.|.|:..:::.:.:|..||
Zfish   240 GIAQWAIPVDSS--TLLAVSG-----MNTENTDS-QRLNKIISEIQALQEVVTRFRQLRLDATEF 296

  Fly   493 ACLKAIVLFR-------PETRGLKDPAQIENLQDQAHVMLSQHTKTQFTAQIARFGRLLLMLPLL 550
            ||||.||.|:       .|.|..::.:.|..|||:|.:.|:.:..|::..|..|||:|||:||.|
Zfish   297 ACLKCIVTFKAVPTHSGSELRSFRNASAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPAL 361

  Fly   551 RMISSHKIESIYFQRTIGNTPMEKVLCDMYKN 582
            |.:....||.::|::||||.|:.::|.||||:
Zfish   362 RSVGPSTIEEVFFKKTIGNVPITRLLSDMYKS 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr51NP_611032.2 NR_DBD_PNR 103..194 CDD:143528 60/87 (69%)
NR_LBD_Tlx_PNR_like 354..569 CDD:132748 81/221 (37%)
nr2e1NP_001003608.1 NR_DBD_TLX 19..110 CDD:143537 60/87 (69%)
NR_LBD_Tlx_PNR_like 165..380 CDD:132748 84/257 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D373206at33208
OrthoFinder 1 1.000 - - FOG0001683
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X118
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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