DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr51 and nr2f6a

DIOPT Version :10

Sequence 1:NP_611032.2 Gene:Hr51 / 36702 FlyBaseID:FBgn0034012 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_991120.1 Gene:nr2f6a / 325637 ZFINID:ZDB-GENE-030131-4362 Length:402 Species:Danio rerio


Alignment Length:491 Identity:151/491 - (30%)
Similarity:207/491 - (42%) Gaps:178/491 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 CVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIYRCQAGTGRCVVDKAHRNQCQACRLKKCLQM 175
            ||||||.|||||||:..|.||..||||||||.|.|.|::... |.:|:.||||||.||||||.::
Zfish    53 CVVCGDKSSGKHYGVFTCEGCKSFFKRSVRRNLNYTCRSNRD-CQIDQHHRNQCQYCRLKKCFRV 116

  Fly   176 GMNKDAVQNERQPRNTATIRPETLREMEHGRALREAAVAVGVFGPPVLLSPPCYGSGLLPPPSLG 240
            ||.|:|||.                                               |.:||    
Zfish   117 GMRKEAVQR-----------------------------------------------GRIPP---- 130

  Fly   241 SLPTGRLLHHNHLTSSMQLAANHMGAGSFPMFNAAGVHHSPKEKAYGMEMATSGNVSHSTNSSSN 305
                                                                    |||      
Zfish   131 --------------------------------------------------------SHS------ 133

  Fly   306 HSIDPS-SPAPENAKEINIAGGSVSSVSSSSPTMENDNDDDSIDVTND--NEEPHAVSRSDSSFI 367
             |:.|| :|...|      |||.||...:..|..|         :.:.  ..||:..||      
Zfish   134 -SLSPSTTPVGGN------AGGGVSEFYNGQPVSE---------LISQLLRAEPYPNSR------ 176

  Fly   368 MPQFMSPNLYTHQH----------------ETVYETSARLLFMAVKWAKNLPSFARLSFRDQVIL 416
                     |:||:                :::.|.:|||||..::||:|:|.|..|...:||.|
Zfish   177 ---------YSHQYNQQMQGGGGGGSGMGIDSICELAARLLFSIIEWARNIPYFPELPVSEQVAL 232

  Fly   417 LEESWSELFLLNAIQWCIPLDPTGCALFSVAEHCNNLENNANGDTCITKEELAA---DVRTLHEI 478
            |..||||||:|||.|..:||. ....|.:...|.:.:          :.|.:.:   .||...:.
Zfish   233 LRLSWSELFILNAAQSALPLH-MAPLLAAAGFHSSPM----------SAERVVSFMDQVRVFQDQ 286

  Fly   479 FCKYKAVLVDPAEFACLKAIVLFRPETRGLKDPAQIENLQDQAHVMLSQHTKTQFTAQIARFGRL 543
            ..|...:.||.||::|||||.||.|:..||.|||.:|:||::|.|.|:::.:.|:..|..|||||
Zfish   287 VEKLTRLQVDSAEYSCLKAIALFSPDACGLTDPAHVESLQEKAQVALTEYERMQYPGQPQRFGRL 351

  Fly   544 LLMLPLLRMISSHKIESIYFQRTIGNTPMEKVLCDM 579
            ||.||.||.:.:..|..::|.|.:|.||:|.::.||
Zfish   352 LLRLPALRAVPASLISQLFFMRLVGKTPIETLIRDM 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr51NP_611032.2 NR_DBD_PNR 103..194 CDD:143528 47/82 (57%)
NR_LBD_Tlx_PNR_like 354..569 CDD:132748 80/233 (34%)
nr2f6aNP_991120.1 NR_DBD_COUP_TF 53..125 CDD:143516 46/72 (64%)
NR_LBD_COUP-TF 158..401 CDD:132746 88/265 (33%)

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