Protein Alignment Hr51 and usp

DIOPT Version :9

• Sequence 1: NP_611032.2
• Gene: Hr51 / 36702
• FlyBaseID: FBgn0034012
• Length: 582
• Species: Drosophila melanogaster
• Sequence 2: NP_001259168.1
• Gene: usp / 31165
• FlyBaseID: FBgn0003964
• Length: 508
• Species: Drosophila melanogaster
• Alignment Length: 606
• Identity: 164/606 - (27%)
• Similarity: 245/606 - (40%)
• Gaps: 166/606 - (27%)

  Fly     9 ETRPSSQELHSPQRHCYTPPPAPMHGQAPPPTSTGVAPPTQPPPPHPAAPNVPNGRLLSWNHSAA 73
            |.:|...:|:......::|     ..::|.|....::.....|..:.|:.|         |:||.
  Fly    18 EVKPDISQLNDSNNSSFSP-----KAESPVPFMQAMSMVHVLPGSNSASSN---------NNSAG 68

  Fly    74 AAAAAAAAQAAANSM----------NHSSAAEGSSMTRIKGQNLGLICVVCGDTSSGKHYGILAC 128
            .|..|.|..:|..|.          ||  ...||..          :|.:|||.:||||||:.:|
  Fly    69 DAQMAQAPNSAGGSAAAAVQQQYPPNH--PLSGSKH----------LCSICGDRASGKHYGVYSC 121

  Fly   129 NGCSGFFKRSVRRKLIYRCQAGTGRCVVDKAHRNQCQACRLKKCLQMGMNKDAVQNERQPRNTAT 193
            .||.|||||:||:.|.|.|:... .|::||..||:||.||.:|||..||.::|||.|||
  Fly   122 EGCKGFFKRTVRKDLTYACRENR-NCIIDKRQRNRCQYCRYQKCLTCGMKREAVQEERQ------ 179

  Fly   194 IRPETLREMEHGRALREAAVAVGVFGPPVLLSPPCYGSGLLPPPSLGSLPTGRLLHHNHLTSSMQ 258
                        |..|.||..:.           ..|.|...|.|:|.             ||.|
  Fly   180 ------------RGARNAAGRLS-----------ASGGGSSGPGSVGG-------------SSSQ 208

  Fly   259 LAANHMGAGSFPMFNAAGVHHSPKEKAYGMEMATSGNVSHS--TNS-SSNHSIDPSSPAPENAKE 320
                  |.|     ...||       :.||   .|||.|..  ||| |.:.||:....|.:.|
  Fly   209 ------GGG-----GGGGV-------SGGM---GSGNGSDDFMTNSVSRDFSIERIIEAEQRA-- 250

  Fly   321 INIAGGSVSSVSSSSPTMENDNDDDSIDVTNDNEEPHAVSRSDSSFIMPQFMSPNLYTHQHETVY 385
                              |....|.::  |.....|::..:.|             |......:.
  Fly   251 ------------------ETQCGDRAL--TFLRVGPYSTVQPD-------------YKGAVSALC 282

  Fly   386 ETSARLLFMAVKWAKNLPSFARLSFRDQVILLEESWSELFLLNAIQWC--IPLDPTGC-----AL 443
            :...:.||..|::|:.:|.||::...||||||:.:|.||.:.| :.||  :.||..|.     .|
  Fly   283 QVVNKQLFQMVEYARMMPHFAQVPLDDQVILLKAAWIELLIAN-VAWCSIVSLDDGGAGGGGGGL 346

  Fly   444 FSVAEHCNNLENNANG----------------DTCITKEELAADVRTLHEIFCKYKAVLVDPAEF 492
                .|..:.|..:.|                ::.|.....|...|.|.|:..|.|.:.:|..|.
  Fly   347 ----GHDGSFERRSPGLQPQQLFLNQSFSYHRNSAIKAGVSAIFDRILSELSVKMKRLNLDRREL 407

  Fly   493 ACLKAIVLFRPETRGLKDPAQIENLQDQAHVMLSQHTKTQFTAQIARFGRLLLMLPLLRMISSHK 557
            :|||||:|:.|:.||:|..|:||..:::.:..|.:|.:.:......||.:|||.||.||.||...
  Fly   408 SCLKAIILYNPDIRGIKSRAEIEMCREKVYACLDEHCRLEHPGDDGRFAQLLLRLPALRSISLKC 472

  Fly   558 IESIYFQRTIGNTPMEKVLCD 578
            .:.::..|...:.|:|::..:
  Fly   473 QDHLFLFRITSDRPLEELFLE 493

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr51	NP_611032.2	NR_DBD_PNR	103..194	CDD:143528	43/90 (48%)
		NR_LBD_Tlx_PNR_like	354..569	CDD:132748	65/237 (27%)
usp	NP_001259168.1	NR_DBD_RXR	102..178	CDD:143514	40/86 (47%)
		NR_LBD_RXR_like	237..480	CDD:132741	71/282 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45444770
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24083
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X118
	4	3.940