DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr51 and nr2f1a

DIOPT Version :10

Sequence 1:NP_611032.2 Gene:Hr51 / 36702 FlyBaseID:FBgn0034012 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_571255.1 Gene:nr2f1a / 30418 ZFINID:ZDB-GENE-980526-115 Length:411 Species:Danio rerio


Alignment Length:564 Identity:172/564 - (30%)
Similarity:227/564 - (40%) Gaps:182/564 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 PQRHCYTPPPAPMHGQAPP----PTSTGVAPPTQPPPPHPAAPNVPNGRLLSWNHSAAAAAAAAA 80
            ||......||:..:..|.|    ..:...||.|...|..|..|:.|               ..|.
Zfish    11 PQEDVAGGPPSGPNPAAQPAREQQQAASAAPHTPQTPSQPGPPSTP---------------GTAG 60

  Fly    81 AQAAANSMNHSSAAEGSSMTRIKGQNLGLICVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIY 145
            .:.:.||        |.|...|:       ||||||.|||||||...|.||..||||||||.|.|
Zfish    61 DKGSQNS--------GQSQQHIE-------CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTY 110

  Fly   146 RCQAGTGRCVVDKAHRNQCQACRLKKCLQMGMNKDAVQNERQPRNTATIRPETLREMEHGRALRE 210
            .|:|.. .|.:|:.||||||.|||||||::||.::|||..|.|..........|..         
Zfish   111 TCRANR-NCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPNPGQYALTN--------- 165

  Fly   211 AAVAVGVFGPPVLLSPPCYGSGLLPPPSLGSLPTGRLLHHNHLTSSMQLAANHMGAGSFPMFNAA 275
                    |.|  |:..||.||.:                     |:.|.|              
Zfish   166 --------GDP--LNGHCYLSGYI---------------------SLLLRA-------------- 185

  Fly   276 GVHHSPKEKAYGMEMATSGNVSHSTNSSSNHSIDPSSPAPENAKEINIAGGSVSSVSSSSPTMEN 340
                                                                             
Zfish   186 ----------------------------------------------------------------- 185

  Fly   341 DNDDDSIDVTNDNEEPHAVSRSDSSFIMPQFMSPNLYTHQHETVYETSARLLFMAVKWAKNLPSF 405
                          ||:..||..|     |.|.|| .....|.:.|.:|||||.||:||:|:|.|
Zfish   186 --------------EPYPTSRYGS-----QCMQPN-NIMGIENICELAARLLFSAVEWARNIPFF 230

  Fly   406 ARLSFRDQVILLEESWSELFLLNAIQWCIPLDPTGCALFSVAEHCNNLENNANGDTCITKEELAA 470
            ..|...|||.||..:|||||:|||.|..:||. ....|.:...|.:.:    :.|..:.   ...
Zfish   231 PDLQITDQVSLLRLTWSELFVLNAAQCSMPLH-VAPLLAAAGLHASPM----SADRVVA---FMD 287

  Fly   471 DVRTLHEIFCKYKAVLVDPAEFACLKAIVLFRPETRGLKDPAQIENLQDQAHVMLSQHTKTQFTA 535
            .:|...|...|.||:.||.||::|:||||||..:..||.|.|.||:||:::...|.::.::|:..
Zfish   288 HIRIFQEQVEKLKALHVDSAEYSCIKAIVLFTSDACGLSDAAHIESLQEKSQCALEEYVRSQYPN 352

  Fly   536 QIARFGRLLLMLPLLRMISSHKIESIYFQRTIGNTPMEKVLCDM 579
            |.:|||:|||.||.||.:||..||.::|.|.:|.||:|.::.||
Zfish   353 QPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr51NP_611032.2 NR_DBD_PNR 103..194 CDD:143528 50/90 (56%)
NR_LBD_Tlx_PNR_like 354..569 CDD:132748 86/214 (40%)
nr2f1aNP_571255.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..68 16/79 (20%)
PRK07764 <10..>65 CDD:236090 14/68 (21%)
NR_DBD_COUP_TF 76..148 CDD:143516 47/72 (65%)
NR_LBD_COUP-TF 174..409 CDD:132746 98/351 (28%)

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