DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr51 and Nr2e1

DIOPT Version :9

Sequence 1:NP_611032.2 Gene:Hr51 / 36702 FlyBaseID:FBgn0034012 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_689415.1 Gene:Nr2e1 / 21907 MGIID:1100526 Length:385 Species:Mus musculus


Alignment Length:500 Identity:174/500 - (34%)
Similarity:255/500 - (51%) Gaps:139/500 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 SMTRIKGQNLGLICVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIYRCQAGT-GRCVVDKAHR 161
            |.:||    |.:.|.||||.|||||||:.||:|||||||||:||...|.|::|. |.|.|||.||
Mouse     7 STSRI----LDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHR 67

  Fly   162 NQCQACRLKKCLQMGMNKDAVQNERQPRNTATIRPETL-----REMEHGRALREAAVAVGVFGPP 221
            |||:||||||||::.|||||||:||.|| |:|||.:..     .:.::|.|..            
Mouse    68 NQCRACRLKKCLEVNMNKDAVQHERGPR-TSTIRKQVALYFRGHKEDNGAAAH------------ 119

  Fly   222 VLLSPPCYGSGLLPPPSLGSLPTGRLLHHNHLTSSMQLAANHMGAGSFPMFNAAGVHHSPKEKAY 286
                   :.|..||.|:.             .|:..||                        :.:
Mouse   120 -------FPSTALPAPAF-------------FTAVTQL------------------------EPH 140

  Fly   287 GMEMATSGNVSHSTNSSSNHSIDPSSPAPENAKEINIAGGSVSSVSSSSPTMENDNDDDSIDVTN 351
            |:|:|.                  .|..||..          :.||.:.||              
Mouse   141 GLELAA------------------VSATPERQ----------TLVSLAQPT-------------- 163

  Fly   352 DNEEPHAVSRSDSSFIMPQFMSPNLYTHQHETVYETSARLLFMAVKWAKNLPSFARLSFRDQVIL 416
             .:.||.|:.:      |.:    ||....|:|.|::||||||::||||::|:|:.||.:||::|
Mouse   164 -PKYPHEVNGT------PMY----LYEVATESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLML 217

  Fly   417 LEESWSELFLLNAIQWCIPLDPTGCALFSVAEHCNNLENNANGDTCITKE--ELAADVRTLHEIF 479
            ||::|.|||:|...||.||:|..  .|.:|        :..|.|...:::  ::.::::.|.|:.
Mouse   218 LEDAWRELFVLGIAQWAIPVDAN--TLLAV--------SGMNTDNTDSQKLNKIISEIQALQEVV 272

  Fly   480 CKYKAVLVDPAEFACLKAIVLFR-------PETRGLKDPAQIENLQDQAHVMLSQHTKTQFTAQI 537
            .:::.:.:|..||||||.||.|:       .|.|..::.|.|..|||:|.:.|:.:..|::..|.
Mouse   273 ARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQP 337

  Fly   538 ARFGRLLLMLPLLRMISSHKIESIYFQRTIGNTPMEKVLCDMYKN 582
            .|||:|||:||.||.||...||.::|::||||.|:.::|.||||:
Mouse   338 CRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMYKS 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr51NP_611032.2 NR_DBD_PNR 103..194 CDD:143528 59/91 (65%)
NR_LBD_Tlx_PNR_like 354..569 CDD:132748 82/223 (37%)
Nr2e1NP_689415.1 NR_DBD_TLX 8..99 CDD:143537 61/95 (64%)
NR_LBD_Tlx_PNR_like 154..369 CDD:132748 86/259 (33%)
Required for transcriptional repression 341..385 23/41 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D373206at33208
OrthoFinder 1 1.000 - - FOG0001683
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X118
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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