DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr51 and Rxrg

DIOPT Version :10

Sequence 1:NP_611032.2 Gene:Hr51 / 36702 FlyBaseID:FBgn0034012 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_033133.1 Gene:Rxrg / 20183 MGIID:98216 Length:463 Species:Mus musculus


Alignment Length:575 Identity:160/575 - (27%)
Similarity:230/575 - (40%) Gaps:197/575 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LHSPQRHCYTPPPAPMHGQAPPPTSTGVAPP------------TQPPPPHPAAPNVPNGRLLSWN 69
            |.||.|...:....|....|.||....||||            ::...|.|..|.:.|       
Mouse    66 LGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNVVNSVSSSEDIKPLPGLPGIGN------- 123

  Fly    70 HSAAAAAAAAAAQAAANSMNHSSAAEGSSMTRIKGQNLGLICVVCGDTSSGKHYGILACNGCSGF 134
                              ||:.|.:.||.:..        ||.:|||.|||||||:.:|.||.||
Mouse   124 ------------------MNYPSTSPGSLVKH--------ICAICGDRSSGKHYGVYSCEGCKGF 162

  Fly   135 FKRSVRRKLIYRCQAGTGRCVVDKAHRNQCQACRLKKCLQMGMNKDAVQNERQPRNTATIRPETL 199
            |||::|:.|||.|:.... |::||..||:||.||.:|||.|||.::|||.|||            
Mouse   163 FKRTIRKDLIYTCRDNKD-CLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQ------------ 214

  Fly   200 REMEHGRALREAAVAVGVFGPPVLLSPPCYGSGLLPPPSLGSLPTGRLLHHNHLTSSMQLAANHM 264
            |..|  ||..||               .|..|      |...:|..|:|       ..:||.   
Mouse   215 RSRE--RAESEA---------------ECASS------SHEDMPVERIL-------EAELAV--- 246

  Fly   265 GAGSFPMFNAAGVHHSPKEKAYGMEMATSGNVSHSTNSSSNHSIDPSSPAPENAKEINIAGGSVS 329
                           .||.::|| :|    ||.:|||       ||                   
Mouse   247 ---------------EPKTESYG-DM----NVENSTN-------DP------------------- 265

  Fly   330 SVSSSSPTMENDNDDDSIDVTNDNEEPHAVSRSDSSFIMPQFMSPNLYTHQHETVYETSARLLFM 394
                               |||                                :...:.:.||.
Mouse   266 -------------------VTN--------------------------------ICHAADKQLFT 279

  Fly   395 AVKWAKNLPSFARLSFRDQVILLEESWSELFLLNAIQWCIPLDPTGCALFSVAEHCNNLENNANG 459
            .|:|||.:|.|:.|:..||||||...|:||.:.:.....:.:...  .|.:...|.:....::.|
Mouse   280 LVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDG--ILLATGLHVHRSSAHSAG 342

  Fly   460 DTCITKEELAADVRTLHEIFCKYKAVLVDPAEFACLKAIVLFRPETRGLKDPAQIENLQDQAHVM 524
            ...|..       |.|.|:..|.|.:.:|.:|..||:|||||.|:.:||.:|:::|.|:::.:..
Mouse   343 VGSIFD-------RVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYAT 400

  Fly   525 LSQHTKTQFTAQIARFGRLLLMLPLLRMISSHKIESIYFQRTIGNTPMEKVLCDM 579
            |..:||.::..|..||.:|||.||.||.|....:|.::|.:.||:||::..|.:|
Mouse   401 LEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDSFLMEM 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr51NP_611032.2 NR_DBD_PNR 103..194 CDD:143528 46/90 (51%)
NR_LBD_Tlx_PNR_like 354..569 CDD:132748 59/214 (28%)
RxrgNP_033133.1 Modulating. /evidence=ECO:0000250 1..138 21/104 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..53
Nuc_recep-AF1 25..134 CDD:463363 20/92 (22%)
NR_DBD_RXR 137..213 CDD:143514 43/84 (51%)
Hinge 205..230 14/59 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..232 12/55 (22%)
NR_LBD_RXR_like 233..441 CDD:132741 78/323 (24%)
Blue background indicates that the domain is not in the aligned region.

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