DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr51 and Rxrb

DIOPT Version :10

Sequence 1:NP_611032.2 Gene:Hr51 / 36702 FlyBaseID:FBgn0034012 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001192143.1 Gene:Rxrb / 20182 MGIID:98215 Length:524 Species:Mus musculus


Alignment Length:607 Identity:153/607 - (25%)
Similarity:229/607 - (37%) Gaps:196/607 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NKEENSSETRPSSQELHSPQRHCYTPPPAPMHGQAPPPTSTGVAPPTQPPP---PHP------AA 57
            ::..:||...|.||.:...     :||..|:...|||       ||..|||   |.|      .:
Mouse    77 SRSPDSSSPNPLSQGIRPS-----SPPGPPLTPSAPP-------PPMPPPPLGSPFPVISSSMGS 129

  Fly    58 PNVPNGRLLSWNHSAAAAAAAAAAQAAANSMNHSSAAEGSSM---TRIKGQNLGL---------- 109
            |.:|           ..|....:...::..:|.:.:..|...   ..:|...||:          
Mouse   130 PGLP-----------PPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPPPPG 183

  Fly   110 -------ICVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIYRCQAGTGRCVVDKAHRNQCQAC 167
                   :|.:|||.|||||||:.:|.||.|||||::|:.|.|.|:.... |.|||..||:||.|
Mouse   184 GPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKD-CTVDKRQRNRCQYC 247

  Fly   168 RLKKCLQMGMNKDAVQNERQPRNTATIRPETLREMEHGRALREAAVAVGVFGPPVLLSPPCYGSG 232
            |.:|||..||.::|||.|||......                                    |.|
Mouse   248 RYQKCLATGMKREAVQEERQRGKDKD------------------------------------GDG 276

  Fly   233 LLPPPSLGSLPTGRLLHHNHLTSSMQLAANHMGAGSFPMFNAAGVHHSPKEKAYGMEMATSGNVS 297
                                           .|||..|       ...|.::....|:|.     
Mouse   277 -------------------------------DGAGGAP-------EEMPVDRILEAELAV----- 298

  Fly   298 HSTNSSSNHSIDPSSPAPENAKEINIAGGSVSSVSSSSPTMENDNDDDSIDVTNDNEEPHAVSRS 362
                              |...:..:.|...:....|||     ||    .|||           
Mouse   299 ------------------EQKSDQGVEGPGATGGGGSSP-----ND----PVTN----------- 325

  Fly   363 DSSFIMPQFMSPNLYTHQHETVYETSARLLFMAVKWAKNLPSFARLSFRDQVILLEESWSELFLL 427
                                 :.:.:.:.||..|:|||.:|.|:.|...||||||...|:||.:.
Mouse   326 ---------------------ICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIA 369

  Fly   428 NAIQWCIPLDPTGCALFSVAEHCNNLENNANGDTCITKEELAADVRTLHEIFCKYKAVLVDPAEF 492
            :.....|  |.....|.:...|.:....::.|...|....|:   |.|.|:..|.:.:.:|..|.
Mouse   370 SFSHRSI--DVRDGILLATGLHVHRNSAHSAGVGAIFDRSLS---RVLTELVSKMRDMRMDKTEL 429

  Fly   493 ACLKAIVLFRPETRGLKDPAQIENLQDQAHVMLSQHTKTQFTAQIARFGRLLLMLPLLRMISSHK 557
            .||:||:||.|:.:||.:|.::|.|:::.:..|..:.|.::..|..||.:|||.||.||.|....
Mouse   430 GCLRAIILFNPDAKGLSNPGEVEILREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKC 494

  Fly   558 IESIYFQRTIGNTPMEKVLCDM 579
            :|.::|.:.||:||::..|.:|
Mouse   495 LEHLFFFKLIGDTPIDTFLMEM 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr51NP_611032.2 NR_DBD_PNR 103..194 CDD:143528 47/107 (44%)
NR_LBD_Tlx_PNR_like 354..569 CDD:132748 59/214 (28%)
RxrbNP_001192143.1 Modulating. /evidence=ECO:0000250 1..191 26/136 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..167 23/112 (21%)
NR_DBD_RXR 191..266 CDD:143514 41/75 (55%)
Hinge 258..382 45/263 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 263..285 10/95 (11%)
NR_LBD_RXR_like 285..502 CDD:132741 71/285 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..323 6/31 (19%)

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