DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr51 and nhr-244

DIOPT Version :9

Sequence 1:NP_611032.2 Gene:Hr51 / 36702 FlyBaseID:FBgn0034012 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_492926.1 Gene:nhr-244 / 191495 WormBaseID:WBGene00014186 Length:173 Species:Caenorhabditis elegans


Alignment Length:61 Identity:15/61 - (24%)
Similarity:23/61 - (37%) Gaps:23/61 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 ANSMNHSSAAEGSSMTRIKGQNLGLICVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIY 145
            |..:|||.:..|.|::.:   ||.:|           .|.:         ||.....||:|
 Worm    67 AKFINHSKSTLGFSLSHL---NLNII-----------EYSV---------FKSFCIWKLVY 104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr51NP_611032.2 NR_DBD_PNR 103..194 CDD:143528 9/43 (21%)
NR_LBD_Tlx_PNR_like 354..569 CDD:132748
nhr-244NP_492926.1 HOLI 10..158 CDD:214658 15/61 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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