DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr51 and nhr-111

DIOPT Version :9

Sequence 1:NP_611032.2 Gene:Hr51 / 36702 FlyBaseID:FBgn0034012 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_507060.2 Gene:nhr-111 / 185757 WormBaseID:WBGene00003701 Length:311 Species:Caenorhabditis elegans


Alignment Length:460 Identity:111/460 - (24%)
Similarity:162/460 - (35%) Gaps:210/460 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 ICVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIYRCQAGTGRCVVDKAHRNQCQACRLKKCLQ 174
            :|.||||||:|.|||:..|.||||||:|:||.||::.|..|.|.||:|||:||:|::||:|||.:
 Worm    41 LCAVCGDTSNGNHYGVPTCFGCSGFFRRTVRNKLVHGCWNGDGNCVIDKANRNRCKSCRIKKCFK 105

  Fly   175 MGMNKDAVQNERQPRNTATIRPETLREMEHGRALREAAVAVGVFGPPVLLSPPCYGSGLLPPPSL 239
            .||||:|||.||      |....|:..:|. .:.||                  |..||||..| 
 Worm   106 KGMNKNAVQPER------TSHSYTVEYVEL-PSFRE------------------YSKGLLPTHS- 144

  Fly   240 GSLPTGRL-LHHNHLTSSMQLAANHMGAGSFPMFNAAGVHHSPKEKAYGMEMATSGNVSHSTNSS 303
                 .|| ..|.|                                                   
 Worm   145 -----DRLRFQHEH--------------------------------------------------- 153

  Fly   304 SNHSIDPSSPAPENAKEINIAGGSVSSVSSSSPTMENDNDDDSIDVTNDNEEPHAVSRSDSSFIM 368
            :.|.||.||                                                        
 Worm   154 AQHEIDTSS-------------------------------------------------------- 162

  Fly   369 PQFMSPNLYTHQHETVYETSARLLFMAVKWAKNLPSFARLS--FRDQVILLEESWSELFLLNAIQ 431
                   :..|            |..|::|.:....||.||  .:.|:||.:  |..|..|    
 Worm   163 -------VLVH------------LKNALQWVQQFSLFAVLSDVEKSQIILTQ--WPHLLCL---- 202

  Fly   432 WCIPLDPTGCALFSVAEHCNNLENNANGDTCITKEELAADVRTLHEIFCKYKAVLVDPAEFACLK 496
                      |||.            |.:.....|:.|       ::..|:|::.:...::..||
 Worm   203 ----------ALFE------------NSEKIFIDEKFA-------QLAEKFKSLELSAQDYFLLK 238

  Fly   497 AIVLFRPETRG--LKDPAQIE---NLQDQAHVMLSQHTKTQFTAQIARFGRLLLMLPLLRMISSH 556
            .|::|.....|  ||...|::   .|.:|.|:..|:          ::.||||.:|..|:..|:.
 Worm   239 GIIIFTETKDGTDLKFDRQLDICIGLLNQLHLESSK----------SKSGRLLFLLGELKSYSTR 293

  Fly   557 KIESI 561
            ::||:
 Worm   294 QLESL 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr51NP_611032.2 NR_DBD_PNR 103..194 CDD:143528 48/83 (58%)
NR_LBD_Tlx_PNR_like 354..569 CDD:132748 43/215 (20%)
nhr-111NP_507060.2 NR_DBD_like 42..114 CDD:143512 44/71 (62%)
Glycosyltransferase_GTB_type 115..>256 CDD:299143 51/332 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166319
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BF3C
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001683
OrthoInspector 1 1.000 - - otm14363
orthoMCL 1 0.900 - - OOG6_108159
Panther 1 1.100 - - O PTHR24083
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.700

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