DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr51 and nhr-265

DIOPT Version :9

Sequence 1:NP_611032.2 Gene:Hr51 / 36702 FlyBaseID:FBgn0034012 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_493092.1 Gene:nhr-265 / 185603 WormBaseID:WBGene00009608 Length:348 Species:Caenorhabditis elegans


Alignment Length:507 Identity:94/507 - (18%)
Similarity:162/507 - (31%) Gaps:215/507 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 CVVCGDTSSGK--HYGILACNGCSGFFKRSVRRKLIYRCQAGTGRCVVDKAHRNQCQACRLKKCL 173
            |.||....|.:  |:|.:.|..|:.||:|:|...:.|.|:.......:.|.:...|:|||.:||:
 Worm    10 CPVCSLPCSMRYSHFGGICCPACASFFRRTVSLNIRYLCKKQNNCSGISKKYHIVCRACRYEKCI 74

  Fly   174 -QMGMNKDAVQNERQPRNTATIRPETL-----REMEHGRALREAAVAVGVFGPPVLLSPPCYGSG 232
             :.||.:..||:::..:|.    |:.:     |::|..|....::        |||.:.|     
 Worm    75 KKAGMKRSLVQHKQSDKNV----PKYILLNEDRDVEFVRGFTTSS--------PVLKASP----- 122

  Fly   233 LLPPPSLGSLPTGRLLHHNHLTSSMQLAANHMGAGSFPMFNAAGVHHSPKEKAYGMEMATSGNVS 297
                  :.|....::|              ::|:.....:....|....|::.            
 Worm   123 ------VASEDFSKIL--------------NIGSRDLLSYYVKQVESVEKQRF------------ 155

  Fly   298 HSTNSSSNHSIDPSSPAPENAKEINIAGGSVSSVSSSSPTMENDNDDD-----SIDVTNDNEEPH 357
                              :||.:|.    ||:.:    .|::..:.|.     .:|:. |.|...
 Worm   156 ------------------KNALQIQ----SVNEL----VTLQRTSTDSCLHCPGVDIL-DRESAQ 193

  Fly   358 AVSRSDSSFIMPQFMSPNLYTHQHETVYETSARLLFMAVKWAKNLPSFARLSFRDQVILLEESWS 422
            |:.:                                             ...|.|  :.|:.:|.
 Worm   194 ALRK---------------------------------------------HFQFAD--VWLDSAWE 211

  Fly   423 -----ELFLLNAIQWCIPLDPTGCALFSVA-EHCNNLE--NNANGDTCITKEELAADVRTLHEIF 479
                 ||                  ||::. .:.|||.  ||.|.    |.:||:       |..
 Worm   212 FSKSPEL------------------LFALGRSNLNNLNSLNNMNN----TNQELS-------EFI 247

  Fly   480 CKYKAVLVDP--------AEFACLKAI----VLFRPETRGLKDPAQIENLQDQAHVMLSQHTKTQ 532
            ...|:.||.|        .|||..|||    :::...:..:|..||            .|:....
 Worm   248 SLVKSTLVSPLSRLRLDITEFAAFKAIATWKLIYHETSTAMKIIAQ------------EQYEGVT 300

  Fly   533 FTAQIARFGRLLLMLPLLRMI--SSHKIESIYFQRTIGN-TPMEKVLCDMYK 581
            |.               ||.|  :|..|:.|.....||: |.:...:.::||
 Worm   301 FA---------------LRRIYKTSRSIDDIEIAVRIGDLTLLVSAISEIYK 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr51NP_611032.2 NR_DBD_PNR 103..194 CDD:143528 26/85 (31%)
NR_LBD_Tlx_PNR_like 354..569 CDD:132748 42/236 (18%)
nhr-265NP_493092.1 ZnF_C4 10..82 CDD:197701 23/71 (32%)
HOLI 173..335 CDD:214658 47/265 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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