DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr51 and nhr-165

DIOPT Version :9

Sequence 1:NP_611032.2 Gene:Hr51 / 36702 FlyBaseID:FBgn0034012 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_493119.2 Gene:nhr-165 / 183558 WormBaseID:WBGene00008158 Length:362 Species:Caenorhabditis elegans


Alignment Length:102 Identity:34/102 - (33%)
Similarity:54/102 - (52%) Gaps:7/102 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 CVVCGDTSSGK-HYGILACNGCSGFFKRSVRRKLIYRCQAGTGRCVVDKAHRNQCQACRLKKCL- 173
            |::||...:.| |:|.|:||.|:.||:|:|...:.|.|: .:..|:.....|..|:|||.:.|: 
 Worm    11 CLICGSICTAKFHFGGLSCNACASFFRRTVSLNIRYLCK-NSNNCITSPGQRTFCKACRYESCVD 74

  Fly   174 QMGMNKDAVQNERQPRNTATIRPETLREMEHGRALRE 210
            :.||.:|.||..|....|    |:.:.....|.:.||
 Worm    75 KAGMKRDFVQQRRSTNAT----PKYILNSTSGSSNRE 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr51NP_611032.2 NR_DBD_PNR 103..194 CDD:143528 30/84 (36%)
NR_LBD_Tlx_PNR_like 354..569 CDD:132748
nhr-165NP_493119.2 ZnF_C4 10..81 CDD:197701 25/70 (36%)
HOLI 186..329 CDD:214658
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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