DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hr51 and nhr-259

DIOPT Version :9

Sequence 1:NP_611032.2 Gene:Hr51 / 36702 FlyBaseID:FBgn0034012 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_492922.1 Gene:nhr-259 / 182960 WormBaseID:WBGene00007770 Length:176 Species:Caenorhabditis elegans


Alignment Length:159 Identity:35/159 - (22%)
Similarity:55/159 - (34%) Gaps:50/159 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   345 DSIDVTNDNEEPH---AVSRSDSSFIMPQFMSPNLYTHQHETVYETSARLLFMAVKWAKNLPSFA 406
            ||:...:.::..|   .|.|..|.||           ||..|...:                |.|
 Worm    48 DSVREYSMSDGAHYEIGVDRKLSEFI-----------HQVRTTLGS----------------SLA 85

  Fly   407 RLSFRDQVILLEESWSELFLLNAIQWCIPLDPTGCALFSVA-EH----CNNLENNANGDTCITKE 466
            .|...    :.|.|..:||.:    |.:....|..||..|| ||    |:.|.|.....|.:...
 Worm    86 NLKLN----MYEYSAFKLFCI----WNLKFHKTSTALKIVAQEHYEGVCSALRNYYETQTKMDDF 142

  Fly   467 ELA-------ADVRTLHEIFCKYKAVLVD 488
            |:|       ..:.|:.:|:..:..:|::
 Worm   143 EIAIRIGDITLQIVTVSDIYHDFIKLLLN 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr51NP_611032.2 NR_DBD_PNR 103..194 CDD:143528
NR_LBD_Tlx_PNR_like 354..569 CDD:132748 33/150 (22%)
nhr-259NP_492922.1 HOLI 8..161 CDD:214658 33/147 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.