DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr51 and nhr-91

DIOPT Version :9

Sequence 1:NP_611032.2 Gene:Hr51 / 36702 FlyBaseID:FBgn0034012 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001024953.1 Gene:nhr-91 / 181621 WormBaseID:WBGene00003681 Length:474 Species:Caenorhabditis elegans


Alignment Length:590 Identity:128/590 - (21%)
Similarity:194/590 - (32%) Gaps:205/590 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 VAPPTQPPPP---------------------HPAAPNVPNGRL-------LSWNHSAAAAAAAAA 80
            ||..|...||                     |.|:..||..:|       .|::.:.:..:....
 Worm     3 VADSTSETPPVFDHDNLALAAQTNLLQFYLTHLASTLVPPMKLDMRDSMTPSFSQTESPNSETDD 67

  Fly    81 AQAAANSMNHS--SAAEGSSMTRIKGQNLGLICVVCGDTSSGKHYGILACNGCSGFFKRSVRRKL 143
            :.:|||.:..|  ......|.:....::...:|.||||.|:|.|||...|.||.|||||||:.|.
 Worm    68 STSAANKVLFSILGTPTTDSTSNAVSKSSSKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKK 132

  Fly   144 IYRCQAGTGRCVVDKAHRNQCQACRLKKCLQMGMNKDAVQNERQP--RNTATI------RPETLR 200
            :|.| :....|.:||.:||:||:||.:||:..||..:||:.:|.|  ||..:|      |...:|
 Worm   133 VYHC-SQDNCCEIDKQNRNRCQSCRFRKCISKGMLTEAVREDRMPGGRNGNSIYSNYKQRRSIIR 196

  Fly   201 ------EMEHGRALREAAVAVGVFGPPVLLSPPCYGSGLLPPPSLGSLPTGRLLHHNHLTSSMQL 259
                  |.:..|..:                               |||:|:.|    :...:::
 Worm   197 KTKDYVEEQERRPFQ-------------------------------SLPSGKKL----IKELVEM 226

  Fly   260 AANHMGAGSFPMFNAAGVHHSPKEKAYGMEMATSGNVSHSTNSSSNHSIDPSSPAPENAKEINIA 324
            .....      :.|..|:..:|                     |:|..|.|:      .|.:...
 Worm   227 DCLDR------LINLKGLRINP---------------------SANCDIAPA------CKRLTRI 258

  Fly   325 GGSVSSVSSSSPTMENDNDDDSIDVTNDNEEPHAVSRSDSSFIMPQFMSPNLYTHQHETVYETSA 389
            |                  |:.::                                         
 Worm   259 G------------------DEIVE----------------------------------------- 264

  Fly   390 RLLFMAVKWAKNLPSFARLSFRDQVILLEESWSELFLLNAIQWC----IPLDPTGCALFSVAEHC 450
                ..|:|.|.||.|..|.......||.:.|:||.||:|..:.    .|..|....:....:..
 Worm   265 ----QLVEWTKTLPFFDELPVEAHTHLLTQRWAELVLLSAGYYACSVFTPDSPDTTEMIDETDEI 325

  Fly   451 N------NLENNANGDTCITKEE------------LAADVRTLHEIFCKYKAVLVDPAEFACLKA 497
            :      ||....|..:.:..:|            |.....||...|...|   |.|..:.|:||
 Worm   326 SFTNPQVNLRLLQNRLSLVLGKEIPLEHVAKEAGPLVTRFTTLLHSFSNLK---VSPEAYVCIKA 387

  Fly   498 IVLFRPETRGLKDPA---QIENLQDQAHVMLSQHT-KTQFTAQIARFGRLLLMLPLLRMISSHKI 558
            |.|.........|.:   ::..|||.....|..|. :....||.....::|..||.||..||..:
 Worm   388 ITLLHLSADSTLDRSIIDKVNTLQDHFVKTLQIHLHQPGEDAQTTSLAQILDWLPDLRNASSVLL 452

  Fly   559 ESIYF 563
            .|..|
 Worm   453 HSKMF 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr51NP_611032.2 NR_DBD_PNR 103..194 CDD:143528 42/92 (46%)
NR_LBD_Tlx_PNR_like 354..569 CDD:132748 50/236 (21%)
nhr-91NP_001024953.1 NR_DBD_DHR4_like 92..181 CDD:143542 41/89 (46%)
NR_LBD_DHR4_like 222..465 CDD:132751 60/335 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24083
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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