DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr51 and nhr-92

DIOPT Version :9

Sequence 1:NP_611032.2 Gene:Hr51 / 36702 FlyBaseID:FBgn0034012 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_500111.3 Gene:nhr-92 / 176971 WormBaseID:WBGene00003682 Length:354 Species:Caenorhabditis elegans


Alignment Length:492 Identity:88/492 - (17%)
Similarity:158/492 - (32%) Gaps:188/492 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 CVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIYRCQAGTGRCVVDKAHRNQCQACRLKKCLQM 175
            |.|||..|:..|:|.:.|:.||.||:|:|.|...|||:. ...|::....||.|:.||..||:.:
 Worm     5 CQVCGVPSARIHFGGVVCSACSAFFRRTVVRGHEYRCKQ-MENCLIVSTIRNMCKKCRYTKCILV 68

  Fly   176 GMNKDAVQNERQPRNTATIRPETLREMEHGRALREAAVAVGVFGPPVLLSPPCYGSGLLPPPSLG 240
            ||.:::||..|.....        ||:....:.:.|:        |:|                 
 Worm    69 GMKRESVQKFRDVYGK--------REITVKNSTKTAS--------PIL----------------- 100

  Fly   241 SLPTGRLLHHNHLTSSMQLAANHMGAGSFPMFNAAGVHHSPKEKAYGMEMATSGNVSHSTNSSSN 305
               ...:.::.||.:..:                                     |.|..||.|.
 Worm   101 ---KDFVKNYEHLENVRR-------------------------------------VIHRDNSRSV 125

  Fly   306 HSIDPSSPAPENAKEINIAGGSVSSVSSSSPTMENDNDDDSIDVTNDNEEPHAVSRSDSSFIMPQ 370
            .:  ..:|.|.|.||.                                          :..::.:
 Worm   126 FA--KEAPRPVNYKEA------------------------------------------TKVLLKE 146

  Fly   371 FMSPNLYTHQHETVYETSARLLFMAVKWAKN-LPSFARLSFRDQVILLEESWSELFLLNAIQWCI 434
            |.                     :...|..| ...|:.|....:..||...:.:..:|....:..
 Worm   147 FK---------------------LVKDWINNSFREFSELPDDQKTTLLHNFYLQFIILEGGYFAC 190

  Fly   435 PLDPTGCALFSVAEH--CNNLE---NNANGDTCITKEELAADVRTLHEIFCKYKAVLVDPA---- 490
            ....|........::  |.|.|   ::.:|...|::.|.:   :.....|..|:..:.||.    
 Worm   191 QYGRTDITYLPSGDYIDCVNPETYYHDPDGQQPISEVEAS---KMFASSFDTYRRNVYDPMIRIA 252

  Fly   491 ----EFACLKAIVLF-----------RPETRGLKDPAQIENLQDQAHVMLSQHTKTQFTAQIARF 540
                ||..|.|:.||           ....|.:::..|.|.||      .|:.|:::..:.| |.
 Worm   253 CDKFEFLALTALTLFDTGLEGQSDQCTESCRRIRESVQREVLQ------YSKLTRSELDSSI-RL 310

  Fly   541 GRLLLMLPLLR--------------MISSHKIESIYF 563
            |.:|.:||.|:              :::::.::.|::
 Worm   311 GDILSILPNLQRATQRFHEDMTISNVMNAYSVDEIFY 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr51NP_611032.2 NR_DBD_PNR 103..194 CDD:143528 31/82 (38%)
NR_LBD_Tlx_PNR_like 354..569 CDD:132748 40/249 (16%)
nhr-92NP_500111.3 ZnF_C4 5..73 CDD:197701 28/68 (41%)
Hormone_recep 129..330 CDD:278530 44/273 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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