DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arf6 and Arl5b

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_083742.3 Gene:Arl5b / 75869 MGIID:1923119 Length:179 Species:Mus musculus


Alignment Length:174 Identity:77/174 - (44%)
Similarity:117/174 - (67%) Gaps:3/174 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKLLSK---IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVW 62
            ||.:.:|   :|.|:|.:::::|||.||||||||:..:.:.|.|.||:|.|||.:..||..|.:|
Mouse     1 MGLIFAKLWSLFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMW 65

  Fly    63 DVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLP 127
            |:|||:.:|..|..||:.|:.:|.|||..||:|:...:.||:|::...::|.|.:||||||||:.
Mouse    66 DIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMK 130

  Fly   128 DAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWLTS 171
            ..|...||.:.|.|:.|:|..|::|..||.:|:||.:||.|:||
Mouse   131 GCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTS 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 77/174 (44%)
Arl5bNP_083742.3 Arl5_Arl8 3..175 CDD:133353 75/172 (44%)

Return to query results.
Submit another query.