DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf51F and arf4a

DIOPT Version :9

Sequence 1:NP_523751.2 Gene:Arf51F / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_001003590.1 Gene:arf4a / 445196 ZFINID:ZDB-GENE-040801-109 Length:180 Species:Danio rerio


Alignment Length:170 Identity:113/170 - (66%)
Similarity:138/170 - (81%) Gaps:0/170 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVG 65
            :..:.|::||.|:|||||:|||||||||||||||||:.||||||:|||||||.|||:.|.|||||
Zfish     5 ISSVFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVG 69

  Fly    66 GQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAM 130
            ||||||||||||:..|||||||||..||:|..|:..||.:::.:.|:|||::||||||||||:||
Zfish    70 GQDKIRPLWRHYFQNTQGLIFVVDSNDRERAQESAEELQKMLQEDELRDAVLLIFANKQDLPNAM 134

  Fly   131 KPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWLT 170
            ...|:.:||||..:|.|.||||.:|||.|.||.|||.||:
Zfish   135 PISELTDKLGLQNLRSRTWYVQAACATQGTGLYEGLDWLS 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf51FNP_523751.2 P-loop_NTPase 1..174 CDD:422963 113/170 (66%)
arf4aNP_001003590.1 P-loop_NTPase 1..180 CDD:304359 113/170 (66%)
SAR 15..175 CDD:197556 110/160 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 1 1.010 - - D1362554at2759
OrthoFinder 1 1.000 - - FOG0000118
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.930

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