DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arf51F and Arl2

DIOPT Version :9

Sequence 1:NP_523751.2 Gene:Arf51F / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster


Alignment Length:162 Identity:70/162 - (43%)
Similarity:103/162 - (63%) Gaps:2/162 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTI-PTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWR 75
            :|||||:||||.|||||||.:.. |:.:.|| ||:|||::|:.:.....|:||||||..:|..||
  Fly    15 REMRILLLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHNGYTLNMWDVGGQKSLRSYWR 78

  Fly    76 HYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLG 140
            :|:..|.||::|||.|||.|::....||..::.:..:..|.:|:..||||||.|:..:||:|.|.
  Fly    79 NYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPGALSSNEIKEILH 143

  Fly   141 LTRIRDRNWYVQPSCATSGDGLSEGLIWLTSN 172
            |..|...:|.|....|.:|:.|...:.||.::
  Fly   144 LEDITTHHWLVAGVSAVTGEKLLSSMDWLIAD 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf51FNP_523751.2 P-loop_NTPase 1..174 CDD:422963 70/162 (43%)
Arl2NP_476886.1 Arl2 3..175 CDD:206720 70/160 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455904
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.