DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and arl4aa

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_957154.1 Gene:arl4aa / 393834 ZFINID:ZDB-GENE-040426-1878 Length:200 Species:Danio rerio


Alignment Length:159 Identity:74/159 - (46%)
Similarity:105/159 - (66%) Gaps:6/159 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 MRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTY-----KNVKFNVWDVGGQDKIRPL 73
            :.|.:||||:|||||:||:|:..:.|.|:||.|||.|.|..     :.|.|:.||||||:|:|||
Zfish    21 LHIAILGLDSAGKTTVLYRLQFNEFVNTVPTRGFNAEKVRIPVGDSRTVTFHFWDVGGQEKLRPL 85

  Fly    74 WRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEK 138
            |:.|...|.|::||||..|.:|::||:|||::|....|.:...:||.|||||:..|:...:|:..
Zfish    86 WKSYTRCTDGIVFVVDSLDAERMEEAKTELYKIARSTENQGVPVLIIANKQDMRQALPLSQIETM 150

  Fly   139 LGLTRIRDRN-WYVQPSCATSGDGLSEGL 166
            |.|..:.... |::||:||..||||.|||
Zfish   151 LALNELGPSTPWHLQPTCAIIGDGLKEGL 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 74/159 (47%)
arl4aaNP_957154.1 Arl4_Arl7 20..193 CDD:206719 74/159 (47%)

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